iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1145__AT3G47890.1	fgenesh2_kg.5__1145__AT3G47890.1	fgenesh2_kg.5__1145__AT3G47890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.50e-27	96.6	1238	1569

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavs 69
           tGl+N      C++N ++Q+L+n+  +r  +l++ + + ++      + ++++sl +++++l     + +k+ v+
   Q: 1238 TGLQNEvgEYNCFLNVIIQSLWNLGLFRAEFLRSSTLEHHHV----GDPCVVCSLYEILTALSaatsEARKEPVA 1308
           57888733347**********************444444444....4556666666666666555559999**** PP
   S: 70   prellkalkkeaee...fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknksl 141
           p++l  al+++ +    f++ + +Da+E+la+++d l++++   ++++++++e+++    s++  + +    +++
   Q: 1309 PSSLRIALSNLYPDssfFQEAQMNDASEVLAVIFDCLHRSFA--QSSSVSDTESTE----SNSTGSWDCANRSCI 1377
           *****999999887556889*********************4..444444444444....33334446778889* PP
   S: 142  isdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke......slqdcLesftkeeelegenkyycek 210
            + lF++ + +q+ c +c+ +s r+ + +++  +++ +  + ++      s++++L+    +++l ++   +   
   Q: 1378 AHSLFGMDIFEQLNCYSCGLES-RHLKYTSFFHNINASALRTMKvtcaenSFDELLNLVEMNHQLACD--PEAGG 1449
           *******************998.666778888888855554444555555999999999999999985..56777 PP
   S: 211  ckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvv 285
           c k       + l++ P+v+++ L + +    + ++    +   ++ e+d+s +      +   k +Y+L++vv+
   Q: 1450 CGKPN--HIHHILTTPPHVFTIVLGWQNTC--ETVEDIAATLAALNTEIDISIMYRG--LDL--KSTYSLVSVVC 1516
           76544..4567899*************544..4677788888889999***965555..344..78********* PP
   S: 286  HsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg...staYvlfYkr 337
           ++G     HY++++ +++++ W+ +dD++V+++ ++++vl++++    ++ vl+Y++
   Q: 1517 YYG----QHYHCFAHSHEHDrWIMYDDQTVKVIgSWSDVLSMCErghLQPQVLLYEK 1569
           ***....9******9966666************779*****9998888899999987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGQKKKAPAP LDSAVIKLEC EKALKSFGRG SYNKAIRLIK DSCSRHQDSA LIHRVQGTIC 60
VKVAAVYEDL ATKHKYLRNA IESARKAVEL SPNSIEFGHF YANLLYEAAN DGKREYDEVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCAGA AGAAGAAAGC CCCCGCGCCG TTGGATTCGG CTGTGATCAA GCTCGAATGC 60
GAGAAGGCAC TCAAGTCATT CGGGCGGGGG AGCTACAACA AGGCGATTCG TCTGATAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

aly:ARALYDRAFT_485153

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	49.37	3.00e-59	221.00
IUUC-Apl-003843	Anas platyrhynchos	32.46	2.00e-38	154.00
IUUC-Ath-007147	Arabidopsis thaliana	92.81	0.00e+00	2763.00
IUUC-Ame-010673	Astyanax mexicanus	32.16	6.00e-43	169.00
IUUC-Bra-016731	Brassica rapa	76.85	0.00e+00	2330.00
IUUC-Cre-022697	Chlamydomonas reinhardtii	32.11	2.00e-41	165.00
IUUC-Cin-025752	Ciona intestinalis	30.94	8.00e-12	62.00
IUUC-Csv-026063	Ciona savignyi	28.44	1.00e-34	139.00
IUUC-Dre-028438	Danio rerio	33.43	1.00e-43	171.00
IUUC-Dno-029317	Dasypus novemcinctus	31.58	1.00e-38	154.00
IUUC-Dor-030249	Dipodomys ordii	32.27	1.00e-38	154.00
IUUC-Dme-032071	Drosophila melanogaster	29.91	2.00e-35	145.00
IUUC-Ete-032403	Echinops telfairi	32.27	3.00e-39	157.00
IUUC-Eeu-035319	Erinaceus europaeus	30.90	8.00e-18	85.50
IUUC-Gmo-039688	Gadus morhua	31.14	5.00e-39	154.00
IUUC-Gma-043691	Glycine max	55.72	0.00e+00	1607.00
IUUC-Hvu-047657	Hordeum vulgare	46.47	9.00e-147	514.00
IUUC-Loc-052180	Lepisosteus oculatus	31.87	5.00e-42	166.00
IUUC-Meu-056802	Macropus eugenii	27.35	1.00e-27	118.00
IUUC-Mor-057219	Magnaporthe oryzae	25.21	2.00e-01	30.80
IUUC-Mga-059684	Meleagris gallopavo	29.45	2.00e-32	134.00
IUUC-Mac-064469	Musa acuminata	47.29	3.00e-166	578.00
IUUC-Opr-070676	Ochotona princeps	30.48	2.00e-19	91.30
IUUC-Ont-072449	Oreochromis niloticus	31.16	3.00e-41	162.00
IUUC-Oba-075174	Oryza barthii	36.71	9.00e-145	508.00
IUUC-Obr-076268	Oryza brachyantha	56.95	4.00e-141	495.00
IUUC-Ogl-077138	Oryza glaberrima	36.66	1.00e-145	510.00
IUUC-Ogu-078705	Oryza glumaepatula	36.55	2.00e-144	506.00
IUUC-Oin-079125	Oryza indica	36.43	8.00e-145	508.00
IUUC-Olo-080872	Oryza longistaminata	57.58	8.00e-123	434.00
IUUC-Ome-081864	Oryza meridionalis	36.70	5.00e-144	506.00
IUUC-Oni-082109	Oryza nivara	36.10	3.00e-143	502.00
IUUC-Opu-083823	Oryza punctata	36.74	8.00e-145	508.00
IUUC-Oru-084310	Oryza rufipogon	36.66	4.00e-149	522.00
IUUC-Osa-085583	Oryza sativa	62.63	1.00e-140	492.00
IUUC-Ppa-095930	Physcomitrella patens	37.25	1.00e-148	521.00
IUUC-Pfo-096829	Poecilia formosa	31.44	6.00e-41	162.00
IUUC-Ppe-101918	Prunus persica	61.06	0.00e+00	1694.00
IUUC-Sar-113376	Sorex araneus	33.71	3.00e-21	97.10
IUUC-Ssc-115969	Sus scrofa	31.69	5.00e-38	152.00
IUUC-Tru-117981	Takifugu rubripes	30.36	2.00e-36	145.00
IUUC-Tsy-119297	Tarsius syrichta	28.91	2.00e-28	120.00
IUUC-Tni-120116	Tetraodon nigroviridis	31.34	4.00e-39	154.00
IUUC-Tae-125619	Triticum aestivum	46.56	5.00e-148	518.00
IUUC-Tur-126027	Triticum urartu	46.72	4.00e-148	518.00
IUUC-Tbe-127607	Tupaia belangeri	32.27	2.00e-39	157.00
IUUC-Ttr-128647	Tursiops truncatus	30.41	2.00e-35	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence