iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095259

Ensembl Protein ID

PP1S6_61V6.1

UniProt Accession

A9RF98; A9RF98_PHYPA

Genbank Protein ID

EDQ82252.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544895

Gene Name

PHYPADRAFT_65344

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S6_61V6	PP1S6_61V6.1	PP1S6_61V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-34	115.8	949	986
UBD/Beta-Prp	1.40e-52	179.5	992	1196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v+ ++   + +++s+s+Dg++k+WD+r++ ++ 
   Q: 949  GHEGKVNIVRMlKGERILSASHDGSVKMWDIRSDSCVA 986
           7999999999876699******************9975 PP

UBD/Beta-Prp

   S: 52   eaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvh 146
            +++ +++++++++il+ ++ D++ +vwd+++gk +h+l gh++ ++sl++    +++v+Gs+d t+rvw +++g c   +l+ h+g+v+ v++ 
   Q: 992  PSPILCMDYDDSTEILAAAGVDGVGNVWDVRAGKKMHSLIGHSSWIRSLRMGD--NSIVTGSDDWTARVWSVSNGACEA-VLACHSGAVTNVEYC 1083
           45677888888888888888888888888888888888888888888888877..788888888888888888888887.888888888888888 PP
   S: 147  pdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgec......vrtlnghtdnvks 227
           + ++ +++Gs+D+ vr+W l   ++ k++  l+g h + + s++  s  + l+ g+ d+t  l+        +         +rt     + v++
   Q: 1084 SADKGIITGSADGLVRIWELaegNSLKCVSSLEGVHAGGILSIKAGS--RWLAVGASDNTMSLFHRPeqddgS--RlppwklLRTPPRSAAVVRC 1174
           87788888888888888888666666777777887777777777666..677777777777777666444331..13444447777777777777 PP
   S: 228  vrfspnderlvsgssDgsiriW 249
           v+ + +  r+ sg+  g +r+W
   Q: 1175 VASDVERGRICSGARNGLLRLW 1196
           7777777777777777777777 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGRLLEYFLV CGLGPDLQTT YIPPTRGYFG TNAYYQPALL DQFPPSELAA CPDPPDQLPV 60
CVLPDGVRIY SQGPSSQDPS SSPRSYPIVL TEGDGSKIYL SCIAFRDPVD DDVAQAYNIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGTGTATT TACATTGCAC AATGATGCCA TCGTTCTCTG TTCCTTCGCC ACCCTTGACA 60
GTGCGTCTCC TCTGCTCCTC TTCTCAACCC TAAATGCTAC CCTGCTCATC AGGATCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR022096--SBF1/SBF2
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF12335--SBF2
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

KEGG

ppp:PHYPADRAFT_65344

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	56.28	0.00e+00	1254.00
IUUC-Aly-005508	Arabidopsis lyrata	53.14	0.00e+00	1203.00
IUUC-Ath-007614	Arabidopsis thaliana	53.22	0.00e+00	1221.00
IUUC-Bdi-014863	Brachypodium distachyon	52.33	0.00e+00	1218.00
IUUC-Bol-015997	Brassica oleracea	52.39	0.00e+00	1185.00
IUUC-Bra-017065	Brassica rapa	52.48	0.00e+00	1185.00
IUUC-Gma-042682	Glycine max	53.87	0.00e+00	1258.00
IUUC-Hvu-047377	Hordeum vulgare	60.25	1.00e-115	408.00
IUUC-Lpe-051109	Leersia perrieri	51.39	0.00e+00	1122.00
IUUC-Mtr-058651	Medicago truncatula	53.50	0.00e+00	1233.00
IUUC-Mac-065420	Musa acuminata	53.12	0.00e+00	1229.00
IUUC-Oba-075961	Oryza barthii	48.12	0.00e+00	850.00
IUUC-Obr-076806	Oryza brachyantha	52.42	0.00e+00	1208.00
IUUC-Ogu-078716	Oryza glumaepatula	49.47	0.00e+00	1083.00
IUUC-Oin-079809	Oryza indica	45.54	0.00e+00	957.00
IUUC-Olo-080386	Oryza longistaminata	49.38	0.00e+00	1124.00
IUUC-Ome-081107	Oryza meridionalis	50.82	0.00e+00	1154.00
IUUC-Oni-082213	Oryza nivara	47.48	0.00e+00	1032.00
IUUC-Opu-083850	Oryza punctata	50.20	0.00e+00	686.00
IUUC-Oru-084982	Oryza rufipogon	51.26	0.00e+00	1101.00
IUUC-Osa-086141	Oryza sativa	52.86	0.00e+00	1197.00
IUUC-Olu-087744	Ostreococcus lucimarinus	30.73	2.00e-39	157.00
IUUC-Pop-100034	Populus trichocarpa	53.54	0.00e+00	1252.00
IUUC-Ppe-101883	Prunus persica	52.53	0.00e+00	996.00
IUUC-Smo-109566	Selaginella moellendorffii	57.44	0.00e+00	1315.00
IUUC-Sit-109736	Setaria italica	53.40	0.00e+00	1246.00
IUUC-Sly-111483	Solanum lycopersicum	54.42	0.00e+00	1282.00
IUUC-Sbi-113820	Sorghum bicolor	52.83	0.00e+00	1234.00
IUUC-Tca-121657	Theobroma cacao	55.37	0.00e+00	1261.00
IUUC-Tae-124598	Triticum aestivum	51.90	0.00e+00	1234.00
IUUC-Tur-126080	Triticum urartu	49.63	0.00e+00	754.00
IUUC-Vvi-131550	Vitis vinifera	53.40	0.00e+00	1216.00
IUUC-Yli-134429	Yarrowia lipolytica	32.62	1.00e-32	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence