iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-123009

Ensembl Protein ID

TRIAE_CS42_4AL_TGACv1_289538_AA0972750.1

UniProt Accession

A0A1D5X3W7; A0A1D5X3W7_WHEAT

Protein Name

Protein HIRA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_4AL_TGACv1_289538_AA0972750	TRIAE_CS42_4AL_TGACv1_289538_AA0972750.1	TRIAE_CS42_4AL_TGACv1_289538_AA0972750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-18	68.2	123	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+t+++W+++ g ++
   Q: 123  GHTADVVDLNWsPDdSTLASGSLDNTVHIWSMTNGICT 160
           8***********77799****************99886 PP

Organism

Triticum aestivum

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MLTEKPSWVR HDGLQIFSID IQPSGLRFAT GGGDQKVRIW NMKSVSKDNQ NDDSNQRLLA 60
TMRDHFGSVN CVRWAKHGRY LASGSDDQAI LIHERKAGSG TSEFGSGEPA DIENWKVVMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCGTGT TCCTCGCCCC GCCGCCGCCG CGGCGCCCTC CTTCTCGCCG CCGTCCCCGA 60
GCTCGGCCGC CTCCCCCCGT AAATCCACCC GCCTCCGTCA TCCCGAACCC CCGGAGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	98.31	0.00e+00	1362.00
IUUC-Atr-003132	Amborella trichopoda	52.43	0.00e+00	847.00
IUUC-Aly-005446	Arabidopsis lyrata	60.63	0.00e+00	763.00
IUUC-Ath-007627	Arabidopsis thaliana	50.11	0.00e+00	741.00
IUUC-Bdi-014075	Brachypodium distachyon	88.50	0.00e+00	1192.00
IUUC-Bol-016440	Brassica oleracea	59.42	0.00e+00	748.00
IUUC-Bra-016651	Brassica rapa	58.91	0.00e+00	711.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	42.41	2.00e-35	145.00
IUUC-Dor-030687	Dipodomys ordii	28.67	2.00e-22	102.00
IUUC-Ete-032384	Echinops telfairi	27.53	7.00e-21	97.10
IUUC-Gma-044252	Glycine max	62.45	0.00e+00	869.00
IUUC-Hvu-047587	Hordeum vulgare	96.46	0.00e+00	1370.00
IUUC-Lpe-051209	Leersia perrieri	82.99	0.00e+00	1101.00
IUUC-Meu-055914	Macropus eugenii	27.52	4.00e-24	107.00
IUUC-Mtr-057744	Medicago truncatula	66.07	0.00e+00	852.00
IUUC-Mac-064768	Musa acuminata	67.51	0.00e+00	895.00
IUUC-Opr-070808	Ochotona princeps	27.37	4.00e-22	100.00
IUUC-Oba-075178	Oryza barthii	84.57	0.00e+00	1088.00
IUUC-Obr-076399	Oryza brachyantha	85.36	0.00e+00	1093.00
IUUC-Ogu-078797	Oryza glumaepatula	84.57	0.00e+00	1088.00
IUUC-Oin-080085	Oryza indica	84.27	0.00e+00	1085.00
IUUC-Ome-081324	Oryza meridionalis	84.27	0.00e+00	1085.00
IUUC-Oni-082548	Oryza nivara	84.11	0.00e+00	1083.00
IUUC-Oru-084339	Oryza rufipogon	84.57	0.00e+00	1088.00
IUUC-Osa-085782	Oryza sativa	84.57	0.00e+00	1088.00
IUUC-Oar-089229	Ovis aries	48.98	2.00e-33	139.00
IUUC-Ppa-095499	Physcomitrella patens	41.80	5.00e-135	476.00
IUUC-Pop-099587	Populus trichocarpa	62.59	0.00e+00	822.00
IUUC-Ppe-101261	Prunus persica	53.79	0.00e+00	865.00
IUUC-Ssl-108629	Sclerotinia sclerotiorum	23.05	2.00e-19	92.00
IUUC-Smo-109186	Selaginella moellendorffii	45.58	1.00e-142	501.00
IUUC-Sit-109980	Setaria italica	69.48	0.00e+00	1113.00
IUUC-Sly-111547	Solanum lycopersicum	60.11	0.00e+00	811.00
IUUC-Stu-112705	Solanum tuberosum	60.63	0.00e+00	820.00
IUUC-Sbi-114528	Sorghum bicolor	67.49	0.00e+00	1071.00
IUUC-Tca-121765	Theobroma cacao	61.80	0.00e+00	837.00
IUUC-Tvi-122262	Trichoderma virens	24.03	4.00e-36	147.00
IUUC-Tur-126483	Triticum urartu	99.86	0.00e+00	1389.00
IUUC-Vvi-131397	Vitis vinifera	64.53	0.00e+00	885.00
IUUC-Xtr-132057	Xenopus tropicalis	47.74	4.00e-36	147.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence