iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015826

Ensembl Protein ID

Bo5g123640.1

UniProt Accession

A0A0D3CJH1; A0A0D3CJH1_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g123640	Bo5g123640.1	Bo5g123640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-23	81.9	455	486
UBD/Beta-Prp	8.70e-46	158.0	409	678

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtl..lvsGsdDgtikvWD 29
           H ++v++laf  +++   +v+++dD+ ikvWD
   Q: 455  HVGRVNDLAFahPNKQicIVTCGDDKLIKVWD 486
           99*********97744478************* PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           ++++  +t v++spd++++ +++  + i v+ ++  +l + l  + h + v+++ f +  k   +vt+++D++ikvwd+ +gk ++t++ghe+sv+s
   Q: 409  KEPSISVTRVAWSPDGNFIGVSFNKHLIHVYAYQGSDLRQHLeiEAHVGRVNDLAFAHPNKqiCIVTCGDDKLIKVWDI-NGKKLYTFEGHEASVYS 504
           555566888*****************************7777669***********99888899**************9.58889************ PP
   S: 100  lsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           +  ++  + +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg+ l+s+++    D+++  W+ + g l rt  g  ++s   ++fd 
   Q: 505  ICPHQkeNIQFIFSTALDGKIKAWLYDNVGSRVDYDAPG-QWCTTMLYSADGSRLFSCGTskdgDSFLVEWNESEGALKRTYLGFRKKSKGVVQFDT 600
           ****98666***************888876666566665.599999999999999999764545778888999*********99999********** PP
   S: 191  ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriW.dlrsgdllktlqlhns 265
           ++++++++++d+++k+wd+ +++++ t ++    ++  ++rf +++++l++ ++D+  +i  + +   +l++++ + +
   Q: 601  TRNRFLAVGEDNQIKFWDMDNTNMLTTAEAEGGLPSlpRLRFNKEGNLLAVSTADNGFKILaNADGLRTLRAYEARSH 678
           *************************99999997665226788899999999999999999555555555555555443 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD LKVFATFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTC TGAGCAGAGA GTTAGTTTTC TTAATCCTCC AGTTCTTAGA TGAAGAGAAG 60
TTCAAGGAAT CTGTTCACAA GTAAGTCTTT TTGTTCTTTG TCTGTTAAGA TTTTGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR003143--Cyt_cd1_C
IPR011048--Haem_d1
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017791	Brassica rapa	97.27	0.00e+00	2189.00
IUUC-Mtr-057839	Medicago truncatula	74.30	0.00e+00	1701.00
IUUC-Mac-064999	Musa acuminata	66.25	0.00e+00	1570.00
IUUC-Ppe-101491	Prunus persica	75.29	0.00e+00	1745.00
IUUC-Sly-111169	Solanum lycopersicum	71.50	0.00e+00	1616.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence