iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099825

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_585933; POPTR_0019s02620g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s02620	POPTR_0019s02620.1	POPTR_0019s02620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.7	135	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl++f   ++ +++lp C H fh +C+ kw       s + +CP+Cr
   Q: 135  CVICLSEFtpgER-VRLLPkCHHGFHVKCIDKW------LSSHSSCPTCR 177
           ********99777.*******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSASTSTTQL FQDFLGDFYS RRLLLHNPLY QSTNTATPPA PGNSAPSEPS TGTGSSFDAN 60
VVMVLSVLLC ALICSLGLNS IIRCALRCSN IAASESAANP STQSANTGVN RRALKSFPVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGCTT CTACTTCAAC TACTCAACTC TTTCAAGATT TTCTTGGGGA CTTCTACTCA 60
AGAAGATTGC TATTACATAA CCCTCTTTAC CAATCAACAA ACACGGCAAC TCCTCCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0019s02620g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016181	Brassica oleracea	62.38	6.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence