iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099142

UUCD1 version

UUC-PoT-01494

Ensembl Protein ID

POPTR_0004s14720.1

UniProt Accession

B9N4Z3; B9H133; B9N4Z3_POPTR

Genbank Protein ID

EEE86672.2

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_581523; POPTR_0004s14720g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s14720	POPTR_0004s14720.1	POPTR_0004s14720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-34	117.0	13	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++p +f+CpIslelM+dPv++ +G+tydrssIe w+a+g++tcPvtr+ lt+ +l+Pn+tlrrliq+wc +n+
   Q: 13   QIPYHFRCPISLELMCDPVTVNTGQTYDRSSIESWVATGNTTCPVTRALLTDFTLIPNHTLRRLIQDWCVANR 85
           5899*****************************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPRSLEPLDL TVQIPYHFRC PISLELMCDP VTVNTGQTYD RSSIESWVAT GNTTCPVTRA 60
LLTDFTLIPN HTLRRLIQDW CVANRAFGVE RIPTPKQPAE PSLVRSLLSQ AASESNPTHS 120

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Nucleotide Sequence
(Fasta)

CTTTCATATA AGAGAGAACA CCCAAGCACT ACAAGCCCAA CAAATCTGAG ACAGGATTTC 60
CAGGCTTCCT CAGATTTGCC ATCACTTCTC ATTCTACCGT TGTTGCCACT CCTAAACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0004s14720g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015539	Brassica oleracea	70.69	5.00e-139	486.00
IUUC-Bra-017533	Brassica rapa	70.52	4.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence