iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099195

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_820446; POPTR_0008s07680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s07680	POPTR_0008s07680.1	POPTR_0008s07680.1

Status

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	6.50e-45	154.1	139	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv.teiscpaaecpekleeseikellveeelykryekllleevveadaalk 89
           C +C+ +++ ++l   + C h fC++C+  y++++i++g     + cp+++c + + ++ i+  l+++e  ++y+++ +++++e ++++k
   Q: 139  CGICFETYPSDRLR-AVVCGHAFCNSCWAGYISTAINDGPGcLMLRCPDPSCNAAVGQDMINV-LTSNEDSDKYSRYFIRSYIEDNRKTK 226
           99***999998887.559*********************8758899***************99.7999********************** PP
   S: 90   wcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCnh 179
           wcpap+C+++v +   + +  v c +c   fC++C ee+H++++C +++++  k++    e+e+++++ ansk+CpkCk +iekn+gC+h
   Q: 227  WCPAPGCDYAVDFIVGSGSYDVIC-RCAYSFCWNCTEEAHRPVDCGTVAKWILKNS---AESENMNWILANSKPCPKCKRPIEKNQGCMH 312
           ***********999988999999*.9***************************999...89***************************** PP
   S: 180  mtC.akCkaefCwlC 193
           +tC   Ck efCwlC
   Q: 313  ITCtPPCKFEFCWLC 327
           ***778********* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVSEDELDMQ DAAAESAEDD FYSGGEEDGF DSDDADVADY EFIDNDSDDS DDLISHRYQQ 60
NYTILSEGDI RQRQDDDIMR IATVLSISKV AATILLRYYN WSVSKVHDEW FADEEKVRRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTAACCAA AACCATAAAG CTTTTCTTCC TGTCTATCCC TCACTTTCCT CTCTTCTCTC 60
CCTTCGCCAA ATCTCCATTT CATCCCTCCG TCTTCCTCTA ATTTACATTC TCTACACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR
SM00547--ZnF_RBZ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s07680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000693	Aegilops tauschii	68.52	0.00e+00	736.00
IUUC-Atr-002495	Amborella trichopoda	77.44	0.00e+00	895.00
IUUC-Aly-005668	Arabidopsis lyrata	71.97	0.00e+00	857.00
IUUC-Ath-006834	Arabidopsis thaliana	72.15	0.00e+00	857.00
IUUC-Ago-007926	Ashbya gossypii	26.68	8.00e-44	171.00
IUUC-Afl-008468	Aspergillus flavus	33.87	2.00e-63	236.00
IUUC-Ang-009538	Aspergillus niger	34.27	2.00e-63	236.00
IUUC-Aor-010009	Aspergillus oryzae	34.03	3.00e-63	235.00
IUUC-Bgr-012016	Blumeria graminis	30.42	6.00e-63	234.00
IUUC-Bdi-014714	Brachypodium distachyon	74.26	0.00e+00	818.00
IUUC-Bol-015311	Brassica oleracea	73.93	0.00e+00	813.00
IUUC-Bra-018031	Brassica rapa	73.38	0.00e+00	813.00
IUUC-Cre-022815	Chlamydomonas reinhardtii	50.00	9.00e-140	489.00
IUUC-Dse-031171	Dothistroma septosporum	35.12	7.00e-72	264.00
IUUC-Fso-038125	Fusarium solani	35.45	1.00e-71	263.00
IUUC-Ggr-039722	Gaeumannomyces graminis	33.71	2.00e-66	245.00
IUUC-Hvu-047322	Hordeum vulgare	74.54	0.00e+00	828.00
IUUC-Lpe-051080	Leersia perrieri	75.23	0.00e+00	836.00
IUUC-Lma-053253	Leptosphaeria maculans	33.05	5.00e-73	268.00
IUUC-Mpo-057553	Magnaporthe poae	32.94	4.00e-66	244.00
IUUC-Mla-058889	Melampsora laricipopulina	26.45	4.00e-43	168.00
IUUC-Mac-065497	Musa acuminata	71.21	0.00e+00	839.00
IUUC-Oba-075918	Oryza barthii	61.74	0.00e+00	668.00
IUUC-Obr-076649	Oryza brachyantha	75.11	0.00e+00	734.00
IUUC-Ogl-077640	Oryza glaberrima	75.42	0.00e+00	836.00
IUUC-Ogu-078785	Oryza glumaepatula	73.38	0.00e+00	802.00
IUUC-Oin-079448	Oryza indica	75.42	0.00e+00	836.00
IUUC-Olo-080626	Oryza longistaminata	72.93	0.00e+00	710.00
IUUC-Ome-081470	Oryza meridionalis	75.79	0.00e+00	839.00
IUUC-Oni-082202	Oryza nivara	73.57	0.00e+00	806.00
IUUC-Opu-084143	Oryza punctata	73.38	0.00e+00	801.00
IUUC-Oru-084778	Oryza rufipogon	73.57	0.00e+00	806.00
IUUC-Osa-086044	Oryza sativa	75.53	0.00e+00	728.00
IUUC-Pma-094243	Petromyzon marinus	28.57	8.00e-54	204.00
IUUC-Pno-095124	Phaeosphaeria nodorum	29.29	2.00e-48	186.00
IUUC-Ppa-095554	Physcomitrella patens	70.71	0.00e+00	765.00
IUUC-Ppe-101468	Prunus persica	87.16	0.00e+00	972.00
IUUC-Pte-104022	Pyrenophora teres	31.92	1.00e-65	243.00
IUUC-Pyt-104643	Pyrenophora triticirepentis	33.05	2.00e-73	269.00
IUUC-Spo-108222	Schizosaccharomyces pombe	33.33	6.00e-66	244.00
IUUC-Ssl-108406	Sclerotinia sclerotiorum	25.12	8.00e-10	57.80
IUUC-Smo-109424	Selaginella moellendorffii	66.67	0.00e+00	757.00
IUUC-Sit-110645	Setaria italica	75.05	0.00e+00	852.00
IUUC-Sly-111226	Solanum lycopersicum	75.55	0.00e+00	908.00
IUUC-Sbi-114839	Sorghum bicolor	74.24	0.00e+00	832.00
IUUC-Sre-115120	Sporisorium reilianum	31.07	7.00e-63	234.00
IUUC-Tca-121539	Theobroma cacao	88.09	0.00e+00	1004.00
IUUC-Tae-123155	Triticum aestivum	74.44	0.00e+00	828.00
IUUC-Tur-126546	Triticum urartu	67.80	0.00e+00	739.00
IUUC-Vda-129939	Verticillium dahliae	34.18	9.00e-66	243.00
IUUC-Vvi-131543	Vitis vinifera	85.54	0.00e+00	976.00
IUUC-Yli-134622	Yarrowia lipolytica	29.30	8.00e-53	201.00
IUUC-Zma-134901	Zea mays	74.07	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence