iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109078

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377619

Gene Name

SELMODRAFT_179550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_179550	EFJ16231	EFJ16231

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	2.60e-44	152.1	134	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv.teiscpaaecpekleeseikellveeelykryekllleevveadaalk 89
           C +C+ ++ v+++   + C h+fC  C++ y++++i++g    ++ cp+++c + + ++ +++l v ee   +y+++ll+++ve +++ k
   Q: 134  CGICFDAFGVDKMR-ATVCGHYFCSLCWTGYVHTAISDGPGcLTLRCPDPSCNAAVGDELVMSL-VCEEDRVKYNRYLLRSFVEDNRKAK 221
           99********9988.669********************987699*******************5.77788899***************** PP
   S: 90   wcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCnh 179
           wcpap+C++++ + + + +  v c kcg+ fC++C e +H++++C++++++  k+     e+e+++++ ansk+CpkCk +iek++gC+h
   Q: 222  WCPAPGCDFALEYFPGSGSHDVVC-KCGHPFCWSCLEDAHRPVDCETVTKWILKNC---AESENMNWILANSKPCPKCKRPIEKSQGCMH 307
           ***************999999***.9**************************9999...89***************************** PP
   S: 180  mtC.akCkaefCwlC 193
           +tC   Ck efCwlC
   Q: 308  ITCtPPCKFEFCWLC 322
           ***778********* PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MDSDDDMQDA YTSDGDYYGD EYSDAMPSDE EDDDSVYPFD DNSMDDLSPS TRAPQNNFVV 60
LSEDEICKRQ EEAVKSVAGV LSISKGDASV LLRHFKWCIS TVNDEWFANE QAVRKTVGLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTTTCTCG ACGATTGAGC TTGGGGGAGA ATGCAAGAGC TGGAGTAGCG GCGGCATCGG 60
ATCTGCGACT CGGCTGCGGC CGTGAGTAGC TGCGCAGCTC GAAAATCTCT GGAATTTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS01358--ZF_RANBP2_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR
SM00184--RING
SM00547--ZnF_RBZ

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_179550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002495	Amborella trichopoda	64.19	0.00e+00	759.00
IUUC-Apl-004184	Anas platyrhynchos	33.84	2.00e-52	199.00
IUUC-Aly-005668	Arabidopsis lyrata	65.27	0.00e+00	719.00
IUUC-Ame-011264	Astyanax mexicanus	33.18	1.00e-59	223.00
IUUC-Bta-013518	Bos taurus	32.71	2.00e-55	209.00
IUUC-Bol-015311	Brassica oleracea	64.64	0.00e+00	697.00
IUUC-Bra-018031	Brassica rapa	64.45	0.00e+00	695.00
IUUC-Cpo-021627	Cavia porcellus	32.71	2.00e-55	209.00
IUUC-Csa-023034	Chlorocebus sabaeus	33.84	2.00e-52	199.00
IUUC-Cho-024444	Choloepus hoffmanni	31.78	5.00e-51	194.00
IUUC-Dno-029205	Dasypus novemcinctus	32.71	2.00e-55	209.00
IUUC-Eca-033431	Equus caballus	33.09	8.00e-54	203.00
IUUC-Fca-035882	Felis catus	35.90	1.00e-51	196.00
IUUC-Fox-037790	Fusarium oxysporum	40.97	1.00e-43	169.00
IUUC-Gac-041708	Gasterosteus aculeatus	33.41	7.00e-60	224.00
IUUC-Ggo-045178	Gorilla gorilla	32.71	2.00e-55	209.00
IUUC-Hsa-045718	Homo sapiens	32.71	2.00e-55	209.00
IUUC-Laf-054351	Loxodonta africana	33.84	1.00e-52	199.00
IUUC-Mdo-062890	Monodelphis domestica	32.71	2.00e-55	209.00
IUUC-Mmu-063433	Mus musculus	32.71	2.00e-55	209.00
IUUC-Mpu-066288	Mustela putorius furo	32.71	2.00e-55	209.00
IUUC-Nle-069263	Nomascus leucogenys	32.71	2.00e-55	209.00
IUUC-Ocu-074000	Oryctolagus cuniculus	33.84	2.00e-52	199.00
IUUC-Olu-087826	Ostreococcus lucimarinus	37.08	1.00e-74	273.00
IUUC-Oga-088706	Otolemur garnettii	32.71	2.00e-55	209.00
IUUC-Ptr-091287	Pan troglodytes	32.71	2.00e-55	209.00
IUUC-Pan-091701	Papio anubis	33.84	1.00e-52	199.00
IUUC-Psi-093814	Pelodiscus sinensis	33.84	1.00e-52	199.00
IUUC-Pab-098132	Pongo abelii	32.71	2.00e-55	209.00
IUUC-Pca-100303	Procavia capensis	36.54	2.00e-42	166.00
IUUC-Pva-102457	Pteropus vampyrus	32.71	2.00e-55	209.00
IUUC-Rno-106083	Rattus norvegicus	32.71	2.00e-55	209.00
IUUC-Sha-106765	Sarcophilus harrisii	33.09	1.00e-53	202.00
IUUC-Tni-120238	Tetraodon nigroviridis	34.03	6.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence