iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016948

Ensembl Protein ID

Bra024081.1-P

UniProt Accession

M4E5M7; M4E5M7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024081	Bra024081.1	Bra024081.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-07	31.0	114	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh dC+  w         + +CPlCr
   Q: 114  CAVCLCEFetEDKLRLLPkCSHAFHVDCIDTW------LLSHSTCPLCR 156
           ********77555999****************......89999*****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MIKTTQNLLS PSSLPRSNTN FDLNSKISPS ILLIIIILSI IFFISGLLHL LVRFLLTPSS 60
RDSEDYFDNV TALQGQLQQL FHLHDSGVDQ SFIDTLPVFH YKSIIGLKNY PFDCAVCLCE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCAAGA CAACTCAGAA TCTCCTCTCT CCTTCATCAC TTCCACGATC CAACACAAAC 60
TTCGATCTAA ACAGCAAGAT CAGTCCAAGC ATTCTCCTAA TAATCATAAT CCTCTCCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	49.02	3.00e-64	239.00
IUUC-Apl-003834	Anas platyrhynchos	36.11	1.00e-14	75.10
IUUC-Aly-006179	Arabidopsis lyrata	82.09	3.00e-162	564.00
IUUC-Bol-015406	Brassica oleracea	98.46	0.00e+00	699.00
IUUC-Gga-041114	Gallus gallus	36.11	1.00e-14	75.10
IUUC-Lpe-051680	Leersia perrieri	47.57	1.00e-55	210.00
IUUC-Mac-064639	Musa acuminata	48.11	1.00e-82	300.00
IUUC-Oba-075403	Oryza barthii	40.28	7.00e-58	217.00
IUUC-Obr-076503	Oryza brachyantha	48.73	8.00e-53	201.00
IUUC-Ogl-077574	Oryza glaberrima	40.14	9.00e-59	220.00
IUUC-Ogu-077986	Oryza glumaepatula	40.14	9.00e-59	220.00
IUUC-Oin-079091	Oryza indica	40.37	5.00e-59	221.00
IUUC-Ome-081627	Oryza meridionalis	47.81	2.00e-57	216.00
IUUC-Oni-082260	Oryza nivara	40.14	9.00e-59	220.00
IUUC-Opu-083578	Oryza punctata	47.81	1.00e-58	220.00
IUUC-Oru-084794	Oryza rufipogon	40.14	9.00e-59	220.00
IUUC-Osa-085348	Oryza sativa	40.37	9.00e-59	220.00
IUUC-Ppa-095197	Physcomitrella patens	37.10	5.00e-32	132.00
IUUC-Sit-109852	Setaria italica	40.92	1.00e-58	220.00
IUUC-Sly-111133	Solanum lycopersicum	47.25	2.00e-85	308.00
IUUC-Stu-112868	Solanum tuberosum	46.65	2.00e-82	299.00
IUUC-Sbi-114435	Sorghum bicolor	41.31	1.00e-60	226.00
IUUC-Tgu-117477	Taeniopygia guttata	35.19	2.00e-15	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence