iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058341

Ensembl Protein ID

KEH19947

UniProt Accession

A0A072TRD2; A0A072TRD2_MEDTR

Genbank Protein ID

KEH19947.1

Protein Name

RING-H2 finger protein ATL47

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g063660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g063660	KEH19947	KEH19947

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	32.4	94	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  +d +++lp C+H+fh dC+  w         + +CPlCr
   Q: 94   CAVCLCQFteQDMLRLLPlCNHAFHIDCIDTW------LLSNSTCPLCR 136
           ********6544499999**************......888889****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNHLVIFIIV ILAIVFFISG ILQLFVRFLI RKRSSLSNSQ SNNNYPQMSE PDPYQRQLQQ 60
LFNLHDSGLD QAFIDALPVF LYKEIIGLKE PFDCAVCLCQ FTEQDMLRLL PLCNHAFHID 120

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Nucleotide Sequence
(Fasta)

AGTGACTCCG TTTTCCGTTC CTCTTTCACC TGTCTGTCTG TAACACAGAA ACAAGTAGCT 60
GCTGTGACAA TCATCATTTT CAACAATTAA GGTTATTCAA CCTTCAACCT TAAACCATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g063660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015919	Brassica oleracea	63.08	3.00e-84	304.00
IUUC-Bra-017741	Brassica rapa	61.74	3.00e-81	294.00
IUUC-Gma-042866	Glycine max	73.65	6.00e-121	426.00
IUUC-Ppe-101745	Prunus persica	59.42	2.00e-93	335.00
IUUC-Sly-111633	Solanum lycopersicum	54.24	2.00e-84	305.00
IUUC-Stu-112810	Solanum tuberosum	54.46	4.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence