iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099751

Ensembl Protein ID

POPTR_0011s08280.1

UniProt Accession

B9N9Q9; B9N9Q9_POPTR

Genbank Protein ID

ERP55401.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_828634; POPTR_0011s08280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s08280	POPTR_0011s08280.1	POPTR_0011s08280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	4.00e-82	278.0	117	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 1    klreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefi.kqvkkkveesedeq.lLktynreWekfreqlkvlrkifay 89
           kl++a+k+i  ++    ++e+ly+av +lcl+k+g +lY ++++ +e++i +++++ v +s d + +Lk + ++W++ + q+ ++r i +y
   Q: 117  KLQSAIKAIFLKQPALCDLEKLYQAVNDLCLHKMGGNLYLRIEKECEAHIsAALQSLVGQSPDLEvFLKLVATCWKDLCDQMLMIRGIALY 207
           5899**********************************************88899******99989************************* PP
   S: 90   ldrtyvkkskkvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqe 178
           ldrtyvk++ +v + ++++l+l+rk++  +  ++++++  +l++ie+eR ge  dr+ll  + +++ +L+     iy esFE +fle t+e
   Q: 208  LDRTYVKQTPNVRSLWDMGLQLFRKHLSLSpeVEHKTVTGILRMIERERLGESADRSLLDHLLKMFTSLG-----IYAESFERPFLECTSE 293
           **************************987778*************************************6.....**************** PP
   S: 179  fykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll.aelvallrdkktedlsrmykLlsrvlng 268
           fy+ae  +++q+++v +Ylk+ve+rlnee++r++ y ++st+++L+++ e +l++ h+ ++l +++  l++ ++ +dl+ my+L+ rv n 
   Q: 294  FYAAEGMKYMQQSDVPDYLKHVESRLNEEQDRCNIYIDASTKKPLIATAETQLLERHISAILdKGFMMLMDGHRIKDLQTMYSLFLRV-NA 383
           **************************************************************999**********************9.68 PP
   S: 269  leellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsv 342
           le l++ l+ +i+  g+ ++++eek+kd   +V +lle+k  l+++ +e+F++++ F  +++ afe+ +n ++v
   Q: 384  LESLRQALSMYIRRTGQGIVMDEEKDKD---MVSSLLEFKASLDSIWEESFSKNEGFCITIKDAFEHLINLRQV 454
           ****************************...***************************************9976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLPTKRSAT ATTSTAGTST SNTYPPMKKA KCQAASACSP LDYNKNGLHH SDDVVFDPSS 60
MSLDDDPKLV DYRPPPAAAN LSRKKATLPQ PAKKLVIKLV KAKPTLPTNF EEDTWAKLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAACACACA CAGATCACTT TATTTTGTTA ATGTCTCTCC CCACCAAACG CTCAGCCACA 60
GCCACCACTA GCACCGCCGG TACTTCCACC TCTAATACTT ACCCTCCAAT GAAGAAGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s08280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002727	Amborella trichopoda	73.90	6.00e-164	570.00
IUUC-Aly-006547	Arabidopsis lyrata	69.89	6.00e-179	620.00
IUUC-Ath-006748	Arabidopsis thaliana	69.15	3.00e-176	611.00
IUUC-Bol-015666	Brassica oleracea	70.55	1.00e-180	625.00
IUUC-Bra-018012	Brassica rapa	74.15	1.00e-178	619.00
IUUC-Gma-043775	Glycine max	87.19	0.00e+00	641.00
IUUC-Hvu-047510	Hordeum vulgare	68.65	8.00e-155	540.00
IUUC-Mtr-058660	Medicago truncatula	82.18	0.00e+00	651.00
IUUC-Mac-064443	Musa acuminata	70.85	0.00e+00	630.00
IUUC-Opr-070671	Ochotona princeps	45.53	5.00e-50	191.00
IUUC-Ogl-077764	Oryza glaberrima	70.56	8.00e-160	556.00
IUUC-Ppe-101142	Prunus persica	79.23	0.00e+00	709.00
IUUC-Tca-121626	Theobroma cacao	83.41	0.00e+00	687.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence