iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017910

Ensembl Protein ID

Bra025586.1-P

UniProt Accession

M4E9X9; M4E9X9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra025586	Bra025586.1	Bra025586.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-26	90.1	143	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +  ++a+ ++ + l s+s Dgt+++WD +tg ++++
   Q: 143  GHKKDLKGIALpQGsDKLFSASSDGTLRIWDCHTGQCVHT 182
           7999999***99555899*******************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSYKAPRRCS NGRNFGVERH QDFAADIAPR RPYENKGPNK WSRNLVWTAS DGNKPRKNGN 60
TYGSTKSQVS GTAASVSQQR KNAGYGQVSD TRGWGSSNRG SPKSKECVCK FWKAGNCKKG 120

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Nucleotide Sequence
(Fasta)

ATGAGTTACA AGGCTCCAAG GAGATGCTCT AACGGAAGGA ACTTTGGAGT GGAAAGACAC 60
CAAGATTTTG CAGCTGATAT AGCTCCGAGA AGACCTTATG AAAACAAGGG TCCTAATAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006210	Arabidopsis lyrata	75.56	0.00e+00	674.00
IUUC-Ath-007068	Arabidopsis thaliana	73.77	0.00e+00	652.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence