iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017217

Ensembl Protein ID

Bra027708.1-P

UniProt Accession

M4EFZ5; M4EFZ5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027708	Bra027708.1	Bra027708.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-28	98.2	303	339

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           H++ vtc+af   +d++++sGs Dg++++WD++++++
   Q: 303  HNNFVTCVAFnpvDDNYFISGSIDGKVRIWDVSRCRV 339
           8889********766****************988765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAFSFNKSTE DNDSSSSSVS EDDELLQPPS VPVSELVVNG SLKEDDSLLL SRNESTSSSS 60
VFDRSSVSSS EETDDRSLIF SRNSSQGLSE SSSSRSGSFR DDSSKKGAQF WLKKLGALTH 120

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Nucleotide Sequence
(Fasta)

ATGGCCTTTA GTTTCAATAA GTCTACCGAA GACAACGACT CCTCCTCCTC CTCTGTCTCT 60
GAAGATGATG AACTTCTTCA ACCACCCTCT GTTCCAGTTT CTGAACTTGT CGTCAACGGC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006273	Arabidopsis lyrata	75.60	0.00e+00	756.00
IUUC-Ath-007069	Arabidopsis thaliana	76.80	0.00e+00	766.00
IUUC-Bol-015863	Brassica oleracea	93.93	0.00e+00	889.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence