iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058067

Ensembl Protein ID

AES87565

UniProt Accession

G7JKP9; G7JKP9_MEDTR

Genbank Protein ID

AES87565.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g030070

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g030070	AES87565	AES87565

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-06	29.1	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp...CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d++ + ++ +   CgH+fh +C+  w       s + +CPlCr
   Q: 110  CSVCLLDYQPEDRLQQipaCGHTFHMSCIDLW------LSSHSTCPLCR 152
           9999999944444433449*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSQSQGCCSS SSSGNRSDAS GVAELKLYRA FIFSVPIFFT LILLFLFYVF YLRPRRVDWS 60
SIRMRSVSVL QHHHNNNATS TSDLGLKKEL REMLPIIVYN ESFSVKDTQC SVCLLDYQPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAAT CTCAAGGTTG TTGTTCCAGT AGCAGCAGTG GTAACAGATC TGATGCTTCT 60
GGAGTAGCTG AATTGAAGCT GTATAGAGCT TTTATATTCT CTGTACCAAT TTTCTTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g030070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	60.39	2.00e-46	177.00
IUUC-Ath-007076	Arabidopsis thaliana	54.80	9.00e-47	179.00
IUUC-Bdi-014087	Brachypodium distachyon	56.21	2.00e-38	151.00
IUUC-Bol-016221	Brassica oleracea	48.56	6.00e-45	172.00
IUUC-Bra-017381	Brassica rapa	73.49	2.00e-36	144.00
IUUC-Gma-043458	Glycine max	69.95	4.00e-60	223.00
IUUC-Lpe-051002	Leersia perrieri	55.06	1.00e-40	159.00
IUUC-Mac-065514	Musa acuminata	52.80	5.00e-38	150.00
IUUC-Oba-075393	Oryza barthii	47.18	4.00e-40	157.00
IUUC-Obr-076149	Oryza brachyantha	45.19	2.00e-40	157.00
IUUC-Ogl-077140	Oryza glaberrima	47.18	4.00e-40	157.00
IUUC-Ogu-078926	Oryza glumaepatula	47.18	4.00e-40	157.00
IUUC-Oin-080003	Oryza indica	47.33	2.00e-33	134.00
IUUC-Ome-081399	Oryza meridionalis	55.84	7.00e-40	156.00
IUUC-Oni-082750	Oryza nivara	47.18	4.00e-40	157.00
IUUC-Opu-083446	Oryza punctata	54.43	3.00e-40	157.00
IUUC-Oru-084873	Oryza rufipogon	47.18	4.00e-40	157.00
IUUC-Osa-085898	Oryza sativa	47.18	4.00e-40	157.00
IUUC-Pop-099279	Populus trichocarpa	48.99	6.00e-30	123.00
IUUC-Ppe-101232	Prunus persica	58.90	6.00e-42	163.00
IUUC-Smo-109214	Selaginella moellendorffii	47.52	2.00e-23	102.00
IUUC-Sit-110610	Setaria italica	52.44	1.00e-39	155.00
IUUC-Sly-111610	Solanum lycopersicum	67.63	4.00e-44	171.00
IUUC-Stu-112875	Solanum tuberosum	69.06	7.00e-46	176.00
IUUC-Sbi-114101	Sorghum bicolor	60.71	8.00e-41	159.00
IUUC-Tca-121298	Theobroma cacao	65.13	7.00e-46	177.00
IUUC-Tae-124847	Triticum aestivum	47.65	2.00e-36	144.00
IUUC-Tur-126109	Triticum urartu	42.65	3.00e-36	144.00
IUUC-Vvi-131331	Vitis vinifera	56.25	1.00e-46	178.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence