iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112875

Ensembl Protein ID

PGSC0003DMT400083235

UniProt Accession

M1D6R2; M1D6R2_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400033135	PGSC0003DMT400083235	PGSC0003DMT400083235

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-06	28.7	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+  +d +   p CgH+fh  C+  w         + +CPlCr
   Q: 118  CSVCLGDYlaDDKLQQIPaCGHTFHMVCIDLW------LAAHNTCPLCR 160
           9*****9998554666779*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSLTGKGYPD PHQESSNNYH NASSNCCSEA LAQLKLYQAF IFSVPILFAF ILLLLFYLFY 60
LRRQRVDWSS LRMRTSTLHT ANESDELSRC EMGLKKEVRE MLPIIVFKES FSVKDTQCSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAAATCTT TCCAACAAAT CGTCCAAAAC CATCTCTCTC TCTTCTTTAT CCTTTTTTCC 60
CCCTCTCTTC TTACCTTCTC TAAAATTGAT AAAGATTCCA TTTTTTCATG TGGGTGTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102580434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	58.12	3.00e-43	167.00
IUUC-Ath-007076	Arabidopsis thaliana	58.12	2.00e-44	170.00
IUUC-Bdi-014087	Brachypodium distachyon	58.78	2.00e-37	147.00
IUUC-Bol-016221	Brassica oleracea	66.67	7.00e-43	165.00
IUUC-Bra-017381	Brassica rapa	65.98	6.00e-35	138.00
IUUC-Gma-043458	Glycine max	62.07	3.00e-37	147.00
IUUC-Lpe-051002	Leersia perrieri	60.67	1.00e-40	158.00
IUUC-Mtr-058067	Medicago truncatula	65.31	1.00e-44	171.00
IUUC-Mac-065514	Musa acuminata	62.94	8.00e-40	155.00
IUUC-Oba-075393	Oryza barthii	63.04	7.00e-40	155.00
IUUC-Obr-076149	Oryza brachyantha	49.76	8.00e-41	159.00
IUUC-Ogl-077140	Oryza glaberrima	63.04	7.00e-40	155.00
IUUC-Ogu-078926	Oryza glumaepatula	63.04	7.00e-40	155.00
IUUC-Oin-080003	Oryza indica	58.70	3.00e-30	122.00
IUUC-Ome-081399	Oryza meridionalis	62.32	3.00e-39	154.00
IUUC-Oni-082750	Oryza nivara	63.04	7.00e-40	155.00
IUUC-Opu-083446	Oryza punctata	63.04	5.00e-40	156.00
IUUC-Oru-084873	Oryza rufipogon	63.04	7.00e-40	155.00
IUUC-Osa-085898	Oryza sativa	63.04	7.00e-40	155.00
IUUC-Pop-099279	Populus trichocarpa	57.04	2.00e-28	118.00
IUUC-Ppe-101232	Prunus persica	64.58	1.00e-39	155.00
IUUC-Smo-109572	Selaginella moellendorffii	46.15	2.00e-25	107.00
IUUC-Sit-110610	Setaria italica	60.14	4.00e-38	150.00
IUUC-Sly-111610	Solanum lycopersicum	91.64	3.00e-117	413.00
IUUC-Sbi-114101	Sorghum bicolor	60.84	1.00e-39	155.00
IUUC-Tca-121298	Theobroma cacao	57.51	1.00e-45	175.00
IUUC-Tae-124847	Triticum aestivum	56.08	5.00e-39	152.00
IUUC-Tur-126109	Triticum urartu	55.41	4.00e-39	153.00
IUUC-Vvi-131331	Vitis vinifera	71.14	4.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence