iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130915

Ensembl Protein ID

VIT_06s0004g02050.t01

UniProt Accession

F6GU49; F6GU49_VITVI

Genbank Protein ID

CCB43713.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594951

Gene Name

VIT_06s0004g02050

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0004g02050	VIT_06s0004g02050.t01	VIT_06s0004g02050.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-09	37.7	255	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C vC+++g+    ++eC++C   fH +Clk+   +e+p+ + wiC+ C++
   Q: 255  ECRVCFKSGRAV--MIECDDCLGGFHLKCLKPR-LKEVPEGD-WICQFCEA 301
           5*********76..*******************.*******7.******85 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MLTFNWDSRK ENKKFRKMIF PQKIHPPFDF RGNSSSFDFR ENPFKTPKEN QKVCFSFASC 60
VFWICFKGLF AVVPLDLNFT NPKSTIFEPD FVSCARAVMA ETPRKSFHSP RKAHKPSPST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTAACTT TCAATTGGGA TTCAAGAAAG GAAAACAAAA AATTTAGAAA AATGATTTTC 60
CCACAGGTTT GTGGTGAAAA ATATATATAG ACAAAAACAA ATACAATCAA AATTAATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003593--AAA+_ATPase
IPR003959--ATPase_AAA_core
IPR001025--BAH_dom
IPR027417--P-loop_NTPase
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00004--AAA
PF01426--BAH
PF00628--PHD

SMART

SM00382--AAA
SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002930	Amborella trichopoda	74.71	0.00e+00	947.00
IUUC-Apl-003874	Anas platyrhynchos	46.03	2.00e-11	63.50
IUUC-Aly-005695	Arabidopsis lyrata	71.82	0.00e+00	971.00
IUUC-Ath-007442	Arabidopsis thaliana	65.90	0.00e+00	942.00
IUUC-Bol-016257	Brassica oleracea	67.86	0.00e+00	956.00
IUUC-Bra-017118	Brassica rapa	68.10	0.00e+00	956.00
IUUC-Cre-022831	Chlamydomonas reinhardtii	41.18	3.00e-43	169.00
IUUC-Fal-037269	Ficedula albicollis	46.03	2.00e-11	63.50
IUUC-Gga-040795	Gallus gallus	46.03	2.00e-11	63.50
IUUC-Gma-044341	Glycine max	70.71	0.00e+00	1154.00
IUUC-Hvu-047826	Hordeum vulgare	68.69	0.00e+00	746.00
IUUC-Lpe-051030	Leersia perrieri	69.60	0.00e+00	869.00
IUUC-Loc-052407	Lepisosteus oculatus	42.86	3.00e-10	59.70
IUUC-Mtr-058324	Medicago truncatula	74.33	0.00e+00	1046.00
IUUC-Mga-059320	Meleagris gallopavo	46.03	2.00e-11	63.50
IUUC-Mmr-061278	Microcebus murinus	43.08	5.00e-11	62.00
IUUC-Mac-065599	Musa acuminata	70.57	0.00e+00	1026.00
IUUC-Oba-075586	Oryza barthii	68.53	0.00e+00	855.00
IUUC-Obr-076569	Oryza brachyantha	70.03	0.00e+00	872.00
IUUC-Ogl-077597	Oryza glaberrima	68.97	0.00e+00	888.00
IUUC-Ogu-078194	Oryza glumaepatula	68.58	0.00e+00	856.00
IUUC-Olo-080478	Oryza longistaminata	67.44	0.00e+00	885.00
IUUC-Ome-081900	Oryza meridionalis	68.82	0.00e+00	889.00
IUUC-Oni-082028	Oryza nivara	65.05	0.00e+00	724.00
IUUC-Oru-085084	Oryza rufipogon	69.29	0.00e+00	860.00
IUUC-Ppa-095664	Physcomitrella patens	56.86	2.00e-133	469.00
IUUC-Pop-099691	Populus trichocarpa	72.43	0.00e+00	1117.00
IUUC-Ppe-102108	Prunus persica	79.13	0.00e+00	1113.00
IUUC-Smo-109166	Selaginella moellendorffii	53.25	0.00e+00	660.00
IUUC-Sit-110797	Setaria italica	63.97	0.00e+00	890.00
IUUC-Tgu-117422	Taeniopygia guttata	46.03	2.00e-11	63.50
IUUC-Tca-121730	Theobroma cacao	79.64	0.00e+00	1065.00
IUUC-Tae-123333	Triticum aestivum	67.14	0.00e+00	879.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence