iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126181

Ensembl Protein ID

TRIUR3_05340-P1

UniProt Accession

M7ZZ05; M7ZZ05_TRIUA

Genbank Protein ID

EMS68408.1

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Genbank Nucleotide ID

KD006994

Gene Name

TRIUR3_05340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_05340	TRIUR3_05340-T1	TRIUR3_05340-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-37	125.0	211	249
UBD/Beta-Prp	2.50e-64	218.0	82	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + + +++f +d + +v+G+ D+ +kvWDl+ g+ll+
   Q: 211  GHRGAIKSIRFtPDgRWIVTGGEDNIVKVWDLTAGKLLH 249
           8***********9999*******************9986 PP

UBD/Beta-Prp

   S: 90   lkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           + +h+++v+sl++ + s+ ++++G++dr +++w + +++ l   lsgh+++v  v+++  + l+ +Gs ++ ++lWdl+ +k++r ltg h +s
   Q: 82   FVAHDAEVRSLAIGKkSSRVFITGGSDRNVNLWAIGKQTPLL-SLSGHTSSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKVVRSLTG-HRSS 173
           568************666************************.*********************************************9.**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
            + ++f++ g++++sgs d+++k+wd++++ c++t++gh+  +ks+rf+p++ ++v+g++D+ +++Wdl+ g+ll+ ++ h 
   Q: 174  CTAVEFHPFGEFFASGSSDTDLKIWDIKKKGCLHTYKGHRGAIKSIRFTPDGRWIVTGGEDNIVKVWDLTAGKLLHDFKFHS 255
           ****************************************************************************998775 PP

Organism

Triticum urartu

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MDPEKRGYKF RILFFLSAYA PRAALGSRLL FLVRFSSRGP QEATVSSSNP GGHLRAGGRR 60
LISPPRIRAF SSGSRNLKLE EFVAHDAEVR SLAIGKKSSR VFITGGSDRN VNLWAIGKQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCCG AGAAGCGCGG CTACAAGTTC CGTATCCTTT TTTTTTTGTC TGCTTACGCT 60
CCGAGAGCTG CTCTTGGTTC ACGACTCCTG TTCTTGGTTC GATTTAGCTC ACGGGGGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000869	Aegilops tauschii	89.85	0.00e+00	1565.00
IUUC-Aml-002187	Ailuropoda melanoleuca	47.28	2.00e-91	328.00
IUUC-Apl-003305	Anas platyrhynchos	46.62	2.00e-92	332.00
IUUC-Aca-004635	Anolis carolinensis	47.83	2.00e-84	306.00
IUUC-Ath-006624	Arabidopsis thaliana	70.72	3.00e-146	511.00
IUUC-Bta-012527	Bos taurus	47.96	7.00e-95	340.00
IUUC-Bdi-014531	Brachypodium distachyon	79.25	0.00e+00	1345.00
IUUC-Bol-015355	Brassica oleracea	69.78	2.00e-144	506.00
IUUC-Bra-017265	Brassica rapa	54.15	3.00e-144	505.00
IUUC-Cja-019706	Callithrix jacchus	47.96	4.00e-94	338.00
IUUC-Cfa-020139	Canis familiaris	40.29	1.00e-86	313.00
IUUC-Cpo-021710	Cavia porcellus	48.30	2.00e-95	342.00
IUUC-Cre-022746	Chlamydomonas reinhardtii	41.02	2.00e-77	282.00
IUUC-Csa-023546	Chlorocebus sabaeus	48.94	2.00e-92	332.00
IUUC-Cin-025156	Ciona intestinalis	42.19	2.00e-80	292.00
IUUC-Csv-025962	Ciona savignyi	44.14	8.00e-79	285.00
IUUC-Cne-027087	Cryptococcus neoformans	27.08	2.00e-30	125.00
IUUC-Cme-027305	Cyanidioschyzon merolae	31.37	1.00e-21	97.10
IUUC-Dre-028215	Danio rerio	46.78	5.00e-92	331.00
IUUC-Dno-029314	Dasypus novemcinctus	47.62	5.00e-94	337.00
IUUC-Dor-030482	Dipodomys ordii	47.96	4.00e-95	341.00
IUUC-Dse-031558	Dothistroma septosporum	29.60	7.00e-28	118.00
IUUC-Dme-032188	Drosophila melanogaster	37.19	5.00e-56	211.00
IUUC-Eca-034143	Equus caballus	47.62	2.00e-91	329.00
IUUC-Fca-035924	Felis catus	47.62	2.00e-94	338.00
IUUC-Fal-037387	Ficedula albicollis	41.15	2.00e-93	335.00
IUUC-Gmo-038692	Gadus morhua	45.76	1.00e-90	326.00
IUUC-Gga-040597	Gallus gallus	46.26	2.00e-92	332.00
IUUC-Gac-042004	Gasterosteus aculeatus	46.78	9.00e-89	320.00
IUUC-Gma-043323	Glycine max	42.68	0.00e+00	633.00
IUUC-Ggo-044761	Gorilla gorilla	47.96	2.00e-94	338.00
IUUC-Hsa-045698	Homo sapiens	47.96	1.00e-94	339.00
IUUC-Hvu-047729	Hordeum vulgare	90.96	0.00e+00	1161.00
IUUC-Itr-048697	Ictidomys tridecemlineatus	47.96	6.00e-95	340.00
IUUC-Lch-049674	Latimeria chalumnae	47.80	1.00e-94	339.00
IUUC-Loc-052623	Lepisosteus oculatus	45.96	4.00e-89	321.00
IUUC-Laf-054587	Loxodonta africana	47.96	7.00e-95	340.00
IUUC-Mcc-055851	Macaca mulatta	47.96	2.00e-94	338.00
IUUC-Meu-056704	Macropus eugenii	48.30	6.00e-95	340.00
IUUC-Mga-059608	Meleagris gallopavo	46.76	3.00e-92	332.00
IUUC-Mmr-061154	Microcebus murinus	47.96	2.00e-94	339.00
IUUC-Mdo-062365	Monodelphis domestica	47.96	6.00e-94	337.00
IUUC-Mmu-063754	Mus musculus	47.96	9.00e-95	340.00
IUUC-Mac-065245	Musa acuminata	52.28	1.00e-179	622.00
IUUC-Mpu-066245	Mustela putorius furo	47.62	4.00e-94	337.00
IUUC-Mlu-067692	Myotis lucifugus	47.96	2.00e-94	338.00
IUUC-Ncr-068688	Neurospora crassa	30.94	5.00e-28	118.00
IUUC-Nle-070051	Nomascus leucogenys	47.62	3.00e-93	335.00
IUUC-Opr-070855	Ochotona princeps	47.96	1.00e-94	339.00
IUUC-Ont-071883	Oreochromis niloticus	46.10	5.00e-88	317.00
IUUC-Oan-073293	Ornithorhynchus anatinus	50.00	5.00e-93	334.00
IUUC-Ocu-074644	Oryctolagus cuniculus	47.96	5.00e-95	340.00
IUUC-Oba-075016	Oryza barthii	73.58	0.00e+00	1120.00
IUUC-Obr-076138	Oryza brachyantha	74.04	0.00e+00	1273.00
IUUC-Ogl-077401	Oryza glaberrima	73.38	0.00e+00	1239.00
IUUC-Ogu-078062	Oryza glumaepatula	70.96	0.00e+00	1253.00
IUUC-Oin-080042	Oryza indica	70.74	0.00e+00	1251.00
IUUC-Olo-080713	Oryza longistaminata	73.80	0.00e+00	1113.00
IUUC-Ome-081192	Oryza meridionalis	73.21	0.00e+00	1076.00
IUUC-Oni-082473	Oryza nivara	70.79	0.00e+00	1245.00
IUUC-Opu-083293	Oryza punctata	67.37	0.00e+00	1155.00
IUUC-Oru-085183	Oryza rufipogon	70.63	0.00e+00	1249.00
IUUC-Osa-085801	Oryza sativa	73.26	0.00e+00	1239.00
IUUC-Ola-087483	Oryzias latipes	44.07	1.00e-84	306.00
IUUC-Oga-087964	Otolemur garnettii	47.96	1.00e-94	339.00
IUUC-Oar-089483	Ovis aries	47.62	8.00e-93	333.00
IUUC-Ptr-091387	Pan troglodytes	47.96	1.00e-94	339.00
IUUC-Pan-092623	Papio anubis	47.96	2.00e-94	338.00
IUUC-Psi-093830	Pelodiscus sinensis	49.64	4.00e-90	324.00
IUUC-Pno-094815	Phaeosphaeria nodorum	29.01	3.00e-26	111.00
IUUC-Ppa-095379	Physcomitrella patens	69.33	2.00e-132	465.00
IUUC-Pfo-096755	Poecilia formosa	44.77	9.00e-87	313.00
IUUC-Pab-097564	Pongo abelii	47.96	6.00e-94	337.00
IUUC-Pop-100006	Populus trichocarpa	47.12	4.00e-156	544.00
IUUC-Pva-102397	Pteropus vampyrus	43.54	8.00e-82	296.00
IUUC-Pte-104275	Pyrenophora teres	33.66	8.00e-31	127.00
IUUC-Pyt-104438	Pyrenophora triticirepentis	34.62	2.00e-30	126.00
IUUC-Rno-105349	Rattus norvegicus	47.96	8.00e-95	340.00
IUUC-Sit-110364	Setaria italica	73.53	0.00e+00	1177.00
IUUC-Sly-110991	Solanum lycopersicum	39.17	6.00e-156	543.00
IUUC-Sar-112953	Sorex araneus	44.30	5.00e-57	214.00
IUUC-Sbi-114389	Sorghum bicolor	66.82	0.00e+00	1100.00
IUUC-Ssc-115949	Sus scrofa	43.21	1.00e-46	179.00
IUUC-Tgu-117461	Taeniopygia guttata	44.25	2.00e-93	335.00
IUUC-Tru-117865	Takifugu rubripes	44.75	4.00e-83	301.00
IUUC-Tni-120903	Tetraodon nigroviridis	44.55	1.00e-82	300.00
IUUC-Tvi-122517	Trichoderma virens	36.80	1.00e-38	154.00
IUUC-Tae-125491	Triticum aestivum	95.20	0.00e+00	1613.00
IUUC-Tme-127031	Tuber melanosporum	31.66	2.00e-29	122.00
IUUC-Ttr-128172	Tursiops truncatus	47.96	2.00e-94	338.00
IUUC-Vvi-130939	Vitis vinifera	66.67	3.00e-146	511.00
IUUC-Xtr-132915	Xenopus tropicalis	40.20	6.00e-89	320.00
IUUC-Xma-134133	Xiphophorus maculatus	44.74	2.00e-85	308.00
IUUC-Zma-135921	Zea mays	73.09	0.00e+00	1196.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence