iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s10560	POPTR_0004s10560.2	POPTR_0004s10560.2
POPTR_0004s10560	POPTR_0004s10560.1	POPTR_0004s10560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-08	34.8	332	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+++f+  ++ vlpCgH f+ +C+q w +++ s ++  +CPlC+
   Q: 332  CVICWTEFSS-TRgVLPCGHRFCYSCIQEWADHMASRRRISTCPLCK 377
           ********66.44379**************99999999999*****7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESVVATVSG YHGSERFNLI KLISQSGASY VGAMSNSTTH LVCWKFEGRK YELASKFDTL 60
VVNHRWVEEC VKQGKRVPEY PYMLESGQEV GPLVLDVPNV DKLGSLNKKR KPLSDKSNNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTCCCTC TCCCTCTCTC TCTGCAAATG AAATAGAAGA CATAAACGAT TCGTCTCAAC 60
GCTGTCTCCT CTCTAACCGA AACGGTGAAA TCTCTCTTTC GATTTTTACT TGCTTTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR011011--Znf_FYVE_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12738--PTCB-BRCT
PF13639--zf-RING_2

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000133	Aegilops tauschii	56.63	2.00e-55	209.00
IUUC-Atr-003095	Amborella trichopoda	37.82	1.00e-77	283.00
IUUC-Apl-003562	Anas platyrhynchos	38.57	4.00e-08	51.20
IUUC-Aly-006322	Arabidopsis lyrata	45.82	3.00e-111	394.00
IUUC-Ath-006604	Arabidopsis thaliana	45.51	3.00e-108	384.00
IUUC-Ang-009518	Aspergillus niger	31.40	4.00e-06	46.60
IUUC-Bdi-014816	Brachypodium distachyon	59.52	3.00e-55	209.00
IUUC-Bol-016032	Brassica oleracea	45.27	3.00e-104	371.00
IUUC-Bra-016767	Brassica rapa	45.23	3.00e-104	371.00
IUUC-Gma-043447	Glycine max	46.38	6.00e-106	377.00
IUUC-Lpe-050685	Leersia perrieri	31.82	1.00e-51	196.00
IUUC-Mtr-058640	Medicago truncatula	44.19	4.00e-100	357.00
IUUC-Mac-065152	Musa acuminata	41.62	2.00e-97	349.00
IUUC-Oba-075202	Oryza barthii	38.43	5.00e-91	327.00
IUUC-Obr-076294	Oryza brachyantha	39.48	8.00e-91	327.00
IUUC-Ogl-077543	Oryza glaberrima	38.42	5.00e-91	327.00
IUUC-Oin-079950	Oryza indica	60.51	4.00e-57	215.00
IUUC-Olo-080275	Oryza longistaminata	37.06	5.00e-91	327.00
IUUC-Ome-081398	Oryza meridionalis	38.70	7.00e-93	333.00
IUUC-Oru-084583	Oryza rufipogon	33.49	3.00e-52	198.00
IUUC-Osa-086181	Oryza sativa	37.66	8.00e-92	330.00
IUUC-Ppe-101454	Prunus persica	51.53	3.00e-133	467.00
IUUC-Smo-109143	Selaginella moellendorffii	46.81	2.00e-26	113.00
IUUC-Sit-110027	Setaria italica	40.31	1.00e-90	326.00
IUUC-Sly-111644	Solanum lycopersicum	42.34	4.00e-107	381.00
IUUC-Stu-112802	Solanum tuberosum	42.10	4.00e-110	390.00
IUUC-Sbi-114201	Sorghum bicolor	37.76	1.00e-84	306.00
IUUC-Tca-121547	Theobroma cacao	46.84	3.00e-127	448.00
IUUC-Tae-125426	Triticum aestivum	56.63	2.00e-55	209.00
IUUC-Tur-126024	Triticum urartu	64.95	2.00e-33	136.00
IUUC-Vvi-131693	Vitis vinifera	52.67	3.00e-129	454.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence