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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007624
UUCD1 version UUC-ArT-01267
Ensembl Protein ID AT3G09080.3
UniProt Accession A0A1I9LSE8; A0A1I9LSE8_ARATH
Genbank Protein ID ANM65506.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002686
Gene Name At3g09080
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G09080 AT3G09080.4 AT3G09080.4
AT3G09080 AT3G09080.1 AT3G09080.1
AT3G09080 AT3G09080.3 AT3G09080.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.00e-25 86.6 687 718
UBD/Beta-Prp 4.50e-53 181.2 518 718
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    gH + vt++ f +d ++++s + Dg i vW l
   Q: 687 GHGEAVTGVIFlPDcKHIISVASDGCIFVWKL 718
    8***********999***************96 PP
   


   UBD/Beta-Prp

   S: 56   tavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhp 147
    t v+ ++ +++l++g++ r+i+++d++ ++++v ++ ++ v+s++f +g k+++ + + ++++d++ + + t++ +g++ v+v+p
   Q: 518 TNVDSENASSLLASGGKGRAIHIYDVKrNFDPVGSVC-GSAAVTSVKFACNGRKMLTSG-ADRLQMFDVNRKASSVRlspshTQTLSHGTIYDVAVDP 613
    5677788888****************999********.899*********998888766.5668*********999999******************* PP
   S: 148 dgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
    ++ l+v+ + D++++++d+++gkl+r + + ++++ ++++d++ ++lv ++t+ ++d+ tge v + +gh + v+ v f+p+ ++++s++sDg
   Q: 614 TSGLVVTVGQDKKINIFDIESGKLVRSFkQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDG 711
    ****************************8444555556788********************************************************* PP
   S: 245 siriWdl 251
    i++W l
   Q: 712 CIFVWKL 718
    *****65 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MKLSQKLKKP SSSTKLILQE IIGLTTKNAN GLASVTCSSK CVYLAGCVVV VYDVDSCTQS 60
HLVVSHRMPK PLSCVAISQN GRFVAAGESP NLSAVLIWDC DTLGLVSELK GHLYGSQCLS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007624|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGACAATCTC ATCTCTCGGA AAATCCCCAG AATCACTCTC TCTCTCTCGC TAGGGTTTCC 60
GATTCCAGAT TCCTCAGAAA TTTTAGTTTT TTTTTAATTG TTTTACCCTA ATCGGAATGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007624|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001371 Ailuropoda melanoleuca 31.02 6.00e-94 338.00
IUUC-Atr-003165 Amborella trichopoda 45.20 0.00e+00 751.00
IUUC-Apl-003236 Anas platyrhynchos 30.98 8.00e-97 348.00
IUUC-Aca-004486 Anolis carolinensis 31.39 1.00e-91 331.00
IUUC-Aly-006434 Arabidopsis lyrata 87.41 0.00e+00 1565.00
IUUC-Ago-007823 Ashbya gossypii 22.80 9.00e-08 52.00
IUUC-Afl-008426 Aspergillus flavus 23.00 4.00e-19 90.10
IUUC-Afu-008757 Aspergillus fumigatus 22.51 8.00e-12 65.90
IUUC-Aor-009966 Aspergillus oryzae 23.00 4.00e-19 90.10
IUUC-Ame-010799 Astyanax mexicanus 32.35 8.00e-102 365.00
IUUC-Bgr-012083 Blumeria graminis 23.10 3.00e-12 67.00
IUUC-Bta-013336 Bos taurus 31.08 1.00e-92 335.00
IUUC-Bci-013828 Botrytis cinerea 22.64 2.00e-15 77.80
IUUC-Bol-016347 Brassica oleracea 80.02 0.00e+00 1760.00
IUUC-Bra-017959 Brassica rapa 80.38 0.00e+00 1771.00
IUUC-Cel-018592 Caenorhabditis elegans 25.87 2.00e-39 158.00
IUUC-Cja-018986 Callithrix jacchus 31.37 1.00e-92 334.00
IUUC-Cfa-020529 Canis familiaris 30.75 8.00e-93 335.00
IUUC-Cpo-021348 Cavia porcellus 32.29 2.00e-94 340.00
IUUC-Cre-022999 Chlamydomonas reinhardtii 28.10 2.00e-15 77.40
IUUC-Csa-023118 Chlorocebus sabaeus 31.97 6.00e-93 335.00
IUUC-Cho-024310 Choloepus hoffmanni 29.29 1.00e-51 197.00
IUUC-Cin-025412 Ciona intestinalis 36.57 4.00e-24 103.00
IUUC-Csv-026079 Ciona savignyi 26.81 7.00e-28 117.00
IUUC-Dre-027495 Danio rerio 31.73 2.00e-93 337.00
IUUC-Dno-029772 Dasypus novemcinctus 31.71 1.00e-94 340.00
IUUC-Dor-030615 Dipodomys ordii 32.06 9.00e-94 338.00
IUUC-Dse-031501 Dothistroma septosporum 31.93 8.00e-11 62.40
IUUC-Dme-032179 Drosophila melanogaster 29.09 8.00e-86 312.00
IUUC-Ete-033108 Echinops telfairi 31.28 6.00e-91 328.00
IUUC-Eca-033836 Equus caballus 31.97 1.00e-92 334.00
IUUC-Eeu-035189 Erinaceus europaeus 30.63 9.00e-81 295.00
IUUC-Fca-035826 Felis catus 30.85 3.00e-93 336.00
IUUC-Fal-037354 Ficedula albicollis 31.07 1.00e-96 348.00
IUUC-Gmo-039644 Gadus morhua 29.67 2.00e-74 273.00
IUUC-Ggr-039729 Gaeumannomyces graminis 25.00 4.00e-23 103.00
IUUC-Gga-040202 Gallus gallus 28.67 2.00e-31 128.00
IUUC-Gac-042491 Gasterosteus aculeatus 30.22 4.00e-77 283.00
IUUC-Gma-043644 Glycine max 49.03 0.00e+00 791.00
IUUC-Ggo-045152 Gorilla gorilla 30.61 4.00e-90 326.00
IUUC-Hsa-046352 Homo sapiens 31.97 9.00e-93 335.00
IUUC-Itr-048210 Ictidomys tridecemlineatus 31.93 1.00e-93 337.00
IUUC-Lch-049450 Latimeria chalumnae 31.21 1.00e-87 317.00
IUUC-Loc-052488 Lepisosteus oculatus 33.02 2.00e-103 370.00
IUUC-Lma-053327 Leptosphaeria maculans 29.73 3.00e-13 70.50
IUUC-Laf-053992 Loxodonta africana 31.54 2.00e-94 340.00
IUUC-Mcc-055747 Macaca mulatta 31.14 2.00e-86 313.00
IUUC-Meu-056200 Macropus eugenii 30.50 2.00e-80 293.00
IUUC-Mtr-058383 Medicago truncatula 54.88 5.00e-128 450.00
IUUC-Mga-059325 Meleagris gallopavo 31.20 1.00e-95 344.00
IUUC-Mmr-061305 Microcebus murinus 32.28 7.00e-95 342.00
IUUC-Mdo-063007 Monodelphis domestica 30.49 9.00e-91 328.00
IUUC-Mmu-064319 Mus musculus 32.33 2.00e-95 343.00
IUUC-Mpu-066532 Mustela putorius furo 30.98 1.00e-93 337.00
IUUC-Mlu-068153 Myotis lucifugus 31.78 2.00e-92 334.00
IUUC-Nfi-068613 Neosartorya fischeri 23.21 6.00e-13 69.30
IUUC-Ncr-068758 Neurospora crassa 27.80 9.00e-12 65.90
IUUC-Nle-069578 Nomascus leucogenys 31.96 7.00e-94 338.00
IUUC-Opr-070397 Ochotona princeps 31.03 5.00e-93 335.00
IUUC-Ont-072247 Oreochromis niloticus 30.58 4.00e-93 336.00
IUUC-Oan-073644 Ornithorhynchus anatinus 30.19 6.00e-77 281.00
IUUC-Ocu-074274 Oryctolagus cuniculus 31.11 1.00e-92 334.00
IUUC-Ola-087185 Oryzias latipes 31.69 9.00e-90 325.00
IUUC-Olu-087860 Ostreococcus lucimarinus 27.44 7.00e-12 65.10
IUUC-Oga-088733 Otolemur garnettii 32.02 1.00e-93 337.00
IUUC-Oar-089569 Ovis aries 32.09 1.00e-94 341.00
IUUC-Ptr-090553 Pan troglodytes 30.61 9.00e-90 325.00
IUUC-Pan-092735 Papio anubis 31.64 3.00e-93 336.00
IUUC-Psi-093457 Pelodiscus sinensis 31.39 6.00e-97 348.00
IUUC-Pma-094285 Petromyzon marinus 33.15 9.00e-101 360.00
IUUC-Pno-094837 Phaeosphaeria nodorum 31.71 9.00e-13 68.90
IUUC-Ppa-095596 Physcomitrella patens 36.82 1.00e-156 547.00
IUUC-Pfo-096375 Poecilia formosa 30.78 9.00e-88 318.00
IUUC-Pab-098737 Pongo abelii 31.97 1.00e-92 335.00
IUUC-Pop-099155 Populus trichocarpa 51.27 0.00e+00 818.00
IUUC-Pca-100959 Procavia capensis 30.77 6.00e-46 179.00
IUUC-Pva-102895 Pteropus vampyrus 30.90 1.00e-95 344.00
IUUC-Pyt-104804 Pyrenophora triticirepentis 27.59 9.00e-12 65.50
IUUC-Rno-105509 Rattus norvegicus 31.79 4.00e-93 336.00
IUUC-Sha-107013 Sarcophilus harrisii 30.54 3.00e-90 326.00
IUUC-Smo-109134 Selaginella moellendorffii 36.82 4.00e-155 541.00
IUUC-Sly-110969 Solanum lycopersicum 48.41 0.00e+00 683.00
IUUC-Stu-112838 Solanum tuberosum 50.00 2.00e-130 458.00
IUUC-Sar-113261 Sorex araneus 30.86 4.00e-90 326.00
IUUC-Ssc-115317 Sus scrofa 30.34 2.00e-92 334.00
IUUC-Tgu-117055 Taeniopygia guttata 31.46 1.00e-95 344.00
IUUC-Tru-118280 Takifugu rubripes 30.52 3.00e-84 306.00
IUUC-Tsy-118799 Tarsius syrichta 28.72 5.00e-48 186.00
IUUC-Tni-120316 Tetraodon nigroviridis 29.66 1.00e-83 303.00
IUUC-Tca-121475 Theobroma cacao 44.61 0.00e+00 854.00
IUUC-Tbe-128005 Tupaia belangeri 30.81 2.00e-67 251.00
IUUC-Ttr-128722 Tursiops truncatus 29.92 1.00e-80 295.00
IUUC-Vpa-130392 Vicugna pacos 46.97 2.00e-14 73.90
IUUC-Vvi-131035 Vitis vinifera 52.31 0.00e+00 835.00
IUUC-Xtr-132966 Xenopus tropicalis 30.12 6.00e-89 322.00
IUUC-Xma-134011 Xiphophorus maculatus 30.97 3.00e-89 323.00
IUUC-Yli-134437 Yarrowia lipolytica 19.93 2.00e-09 57.40
Created Date 25-Jun-2017

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