iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017692

Ensembl Protein ID

Bra034693.1-P

UniProt Accession

M4F0U8; M4F0U8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra034693	Bra034693.1	Bra034693.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-11	44.5	77	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH+ +vt++af  +d +ll+s s Dg++ vW +++
   Q: 77   GHSQRVTDMAFfaQDvHLLASVSLDGKVFVWKISE 111
           8*********99*999***************9765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGRRLTGEHA VYDVDVRLHG EIQPQLEVTP ITKYGSDPQL VVGRQIAVSK VYICYGLKGG 60
SIRVLNINTA LRALFRGHSQ RVTDMAFFAQ DVHLLASVSL DGKVFVWKIS EGSEGDDDPQ 120

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Nucleotide Sequence
(Fasta)

ATGGGGAGGC GGTTGACTGG GGAACACGCT GTGTACGATG TCGACGTGAG GTTGCACGGC 60
GAGATTCAGC CGCAGCTTGA GGTGACTCCG ATTACTAAAT ACGGGTCGGA TCCTCAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014578	Brachypodium distachyon	46.07	0.00e+00	966.00
IUUC-Bol-015338	Brassica oleracea	97.40	0.00e+00	2206.00
IUUC-Ptr-091545	Pan troglodytes	23.94	1.00e-05	44.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence