iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018081

Ensembl Protein ID

Bra035748.1-P

UniProt Accession

M4F3U8; M4F3U8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035748	Bra035748.1	Bra035748.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-13	50.7	172	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH ++v +++f  sd +++vs++ D t+k+W++
   Q: 172  GHRNEVISVDFhpSDkHRFVSCGMDTTVKIWSM 204
           8***********998999*************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKITLGNES LVGSLTPSNK KSYKLTNKIQ EGKTPLYSVA FNFIDARYFT CFVSAGGNGI 60
NLYNCLEDGS ISLLYAFADE DKEEEFNTAS WACRVEGNPF VVAGGEKGII RVIDVNNEKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAAGA TAACTTTAGG AAACGAATCA CTTGTCGGCT CTTTGACTCC ATCCAACAAG 60
AAATCGTACA AACTGACCAA TAAGATTCAA GAAGGGAAGA CACCTTTGTA CTCCGTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence