iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__3601__AT2G20650.1	fgenesh2_kg.3__3601__AT2G20650.1	fgenesh2_kg.3__3601__AT2G20650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-07	30.3	509	553

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++ +       d  +v+pC H+fh  Clq+w         +  CP+Cr
   Q: 509  CVICMTTIdlrhriND-CMVTPCEHIFHSGCLQRW------MDIKMECPTCR 553
           ****998888888666.889***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNNLGNFGVW GLGFFSLSIW FAVLQQANGL RPIRETARSW GDEWRFGKKE KSGAGPFSAW 60
NITGTYRGSW NFLDTVNSSS KFPDFRKESG NSVIELVTSP TKITGVHYVQ GAVVFHDVFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCAAGTTT CCACCTTTGT TCTCTCCAAA CATATATTAT ACTAATAGAC TAGAGAACAA 60
GGCCATAAAG TTTTTAACTT TCTCCCAAAA CGAGAGAGAA AGAATCTCAA ACGACGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_480900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000147	Aegilops tauschii	73.84	7.00e-83	300.00
IUUC-Atr-003038	Amborella trichopoda	72.12	0.00e+00	740.00
IUUC-Ath-007176	Arabidopsis thaliana	97.67	0.00e+00	1088.00
IUUC-Ago-007897	Ashbya gossypii	29.15	1.00e-35	144.00
IUUC-Afu-008993	Aspergillus fumigatus	22.48	3.00e-25	109.00
IUUC-Bdi-014178	Brachypodium distachyon	72.97	0.00e+00	764.00
IUUC-Bra-017095	Brassica rapa	91.09	0.00e+00	990.00
IUUC-Gma-042652	Glycine max	77.40	0.00e+00	845.00
IUUC-Hvu-047407	Hordeum vulgare	71.37	0.00e+00	726.00
IUUC-Lpe-050804	Leersia perrieri	69.04	0.00e+00	713.00
IUUC-Mtr-057662	Medicago truncatula	77.11	0.00e+00	858.00
IUUC-Mac-065030	Musa acuminata	69.01	0.00e+00	747.00
IUUC-Nfi-068252	Neosartorya fischeri	27.47	2.00e-23	103.00
IUUC-Ncr-068860	Neurospora crassa	60.61	2.00e-09	57.80
IUUC-Oba-075543	Oryza barthii	66.60	0.00e+00	647.00
IUUC-Obr-076427	Oryza brachyantha	73.74	0.00e+00	767.00
IUUC-Ogl-077281	Oryza glaberrima	73.46	0.00e+00	775.00
IUUC-Ogu-078135	Oryza glumaepatula	67.83	0.00e+00	650.00
IUUC-Oin-079565	Oryza indica	70.58	0.00e+00	729.00
IUUC-Olo-080765	Oryza longistaminata	60.19	1.00e-163	568.00
IUUC-Ome-081704	Oryza meridionalis	67.21	0.00e+00	645.00
IUUC-Oni-082520	Oryza nivara	63.04	4.00e-134	469.00
IUUC-Opu-083443	Oryza punctata	59.96	1.00e-159	555.00
IUUC-Oru-085261	Oryza rufipogon	66.80	0.00e+00	648.00
IUUC-Osa-085322	Oryza sativa	73.07	3.00e-178	617.00
IUUC-Ppa-095582	Physcomitrella patens	61.38	0.00e+00	670.00
IUUC-Pop-098911	Populus trichocarpa	79.07	0.00e+00	895.00
IUUC-Ppe-102081	Prunus persica	79.08	0.00e+00	908.00
IUUC-Sce-106438	Saccharomyces cerevisiae	28.65	1.00e-33	137.00
IUUC-Smo-109376	Selaginella moellendorffii	58.11	2.00e-180	624.00
IUUC-Sit-109719	Setaria italica	73.36	0.00e+00	744.00
IUUC-Sly-111742	Solanum lycopersicum	77.08	0.00e+00	857.00
IUUC-Stu-112706	Solanum tuberosum	77.48	0.00e+00	857.00
IUUC-Sbi-114347	Sorghum bicolor	73.85	0.00e+00	755.00
IUUC-Tca-121160	Theobroma cacao	80.79	0.00e+00	877.00
IUUC-Tae-125137	Triticum aestivum	71.81	0.00e+00	757.00
IUUC-Tme-126915	Tuber melanosporum	25.65	5.00e-42	165.00
IUUC-Vvi-131478	Vitis vinifera	79.55	0.00e+00	902.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence