iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa001131mg	EMJ26521	EMJ26521
PRUPE_ppa001131mg	EMJ26519	EMJ26519
PRUPE_ppa001131mg	EMJ26520	EMJ26520
PRUPE_ppa001131mg	EMJ26518	EMJ26518

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-26	92.3	660	689
UBD/Beta-Prp	7.40e-49	167.0	608	746

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ +t+++f ++ ++l+++s D+t++vWD
   Q: 660  HSALITDVRFsPSmPRLATSSFDKTVRVWD 689
           999********777**************** PP

UBD/Beta-Prp

   S: 44   l...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdlet.gqcleetlsghdgvv 140
           +   ++s++  + +v+++ fs+dgk+l++g+ D+ + +w  +t k  +tl++h++ +++++fsps  +l++ s d+t+rvwd ++ g+ l+ t+ gh+++v
   Q: 608  TfteVHSVKASTTKVNSCHFSSDGKFLASGGHDKKAVLWYTDTLKVKSTLEEHSALITDVRFSPSMPRLATSSFDKTVRVWDADNpGYSLR-TFMGHSASV 707
           2333666677777777777777777777777777777777777777777777777777777777777777777777777777766345555.777777777 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgg 178
           +++ +hp++ +l+ s+  D+++r W++++g++   ++gg
   Q: 708  MSLDFHPNKdDLICSCDSDGQIRYWSINNGSCSSVFKGG 746
           777777777777777777777777777777777777663 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQLIKAREQQ QQQQQQQQQQ QQQQQQQQSQ QPQHSQQQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTAAGTTT CTTATGCAGA TTGGTCAGTT 60
TCTCTCTCTC TTTTTGTCTC TGTTCCCTAT CTGGGTTTCT GTTTTCTTCT CATTTGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	58.02	0.00e+00	702.00
IUUC-Atr-002973	Amborella trichopoda	70.21	0.00e+00	823.00
IUUC-Aly-006446	Arabidopsis lyrata	72.79	0.00e+00	986.00
IUUC-Ath-006594	Arabidopsis thaliana	69.43	0.00e+00	969.00
IUUC-Bdi-014395	Brachypodium distachyon	62.37	0.00e+00	724.00
IUUC-Bol-015720	Brassica oleracea	72.70	0.00e+00	939.00
IUUC-Bra-017088	Brassica rapa	74.83	0.00e+00	952.00
IUUC-Gma-043258	Glycine max	78.07	0.00e+00	989.00
IUUC-Hvu-047499	Hordeum vulgare	64.94	1.00e-151	528.00
IUUC-Lpe-051536	Leersia perrieri	59.29	0.00e+00	743.00
IUUC-Mtr-058613	Medicago truncatula	76.35	0.00e+00	989.00
IUUC-Mac-064770	Musa acuminata	65.80	0.00e+00	835.00
IUUC-Oba-075419	Oryza barthii	56.91	0.00e+00	658.00
IUUC-Obr-076118	Oryza brachyantha	61.44	0.00e+00	714.00
IUUC-Ogl-077064	Oryza glaberrima	60.00	0.00e+00	731.00
IUUC-Ogu-078816	Oryza glumaepatula	56.64	0.00e+00	644.00
IUUC-Oin-079642	Oryza indica	59.66	0.00e+00	719.00
IUUC-Olo-080338	Oryza longistaminata	59.35	0.00e+00	656.00
IUUC-Ome-081901	Oryza meridionalis	58.99	0.00e+00	692.00
IUUC-Oni-082753	Oryza nivara	56.78	0.00e+00	660.00
IUUC-Opu-083283	Oryza punctata	55.03	0.00e+00	631.00
IUUC-Oru-084538	Oryza rufipogon	57.05	0.00e+00	657.00
IUUC-Osa-086142	Oryza sativa	60.27	0.00e+00	735.00
IUUC-Ppa-095985	Physcomitrella patens	66.90	7.00e-159	552.00
IUUC-Pop-098994	Populus trichocarpa	78.65	0.00e+00	1065.00
IUUC-Smo-108724	Selaginella moellendorffii	56.13	0.00e+00	703.00
IUUC-Sit-109866	Setaria italica	60.13	0.00e+00	744.00
IUUC-Sly-110921	Solanum lycopersicum	75.63	0.00e+00	949.00
IUUC-Sbi-113848	Sorghum bicolor	60.90	0.00e+00	740.00
IUUC-Tca-121720	Theobroma cacao	81.03	0.00e+00	1029.00
IUUC-Tae-124192	Triticum aestivum	60.21	0.00e+00	738.00
IUUC-Tur-126743	Triticum urartu	54.04	0.00e+00	648.00
IUUC-Vvi-131473	Vitis vinifera	79.89	0.00e+00	1051.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence