iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1198__AT1G69400.1	fgenesh2_kg.2__1198__AT1G69400.1	fgenesh2_kg.2__1198__AT1G69400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-08	32.8	14	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           d v+ l+f ++ + l+++s+D  ++++++ +
   Q: 14   DAVSRLRFsPEsNNLLVASWDSYLRLYNVES 44
           778999**9777999*************865 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSGDRLQFEN PIEDAVSRLR FSPESNNLLV ASWDSYLRLY NVESSSLSLE LYSQAALLDC 60
CFENESTSFT SGSDGFIRRY DLNAGTVDTI GRHDDIATSI VYSYEKGEVI STGFDEKIKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTTCTTCT CCATAATTTC TTGAGGAAGT GGTTTCTGGG TTGAAAAACA TGAGCGGAGA 60
TCGACTTCAA TTTGAAAACC CTATAGAAGA TGCGGTTTCG AGACTCAGAT TCTCCCCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_476068

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	44.14	2.00e-65	241.00
IUUC-Ath-007619	Arabidopsis thaliana	93.02	3.00e-164	570.00
IUUC-Bdi-014018	Brachypodium distachyon	43.55	2.00e-71	261.00
IUUC-Bol-016156	Brassica oleracea	80.32	3.00e-148	517.00
IUUC-Bra-017094	Brassica rapa	81.46	1.00e-145	508.00
IUUC-Gma-043264	Glycine max	52.75	4.00e-94	337.00
IUUC-Lpe-051057	Leersia perrieri	44.27	2.00e-68	251.00
IUUC-Mtr-058179	Medicago truncatula	51.99	3.00e-89	321.00
IUUC-Mac-064581	Musa acuminata	48.09	5.00e-79	286.00
IUUC-Oba-075790	Oryza barthii	44.22	2.00e-67	248.00
IUUC-Obr-076040	Oryza brachyantha	45.00	3.00e-69	254.00
IUUC-Ogu-079013	Oryza glumaepatula	40.06	4.00e-63	234.00
IUUC-Oin-080034	Oryza indica	44.52	2.00e-66	245.00
IUUC-Olo-080445	Oryza longistaminata	37.25	3.00e-51	195.00
IUUC-Ome-081933	Oryza meridionalis	40.36	3.00e-64	238.00
IUUC-Oni-082305	Oryza nivara	44.22	1.00e-67	248.00
IUUC-Opu-083254	Oryza punctata	40.33	4.00e-57	214.00
IUUC-Oru-085161	Oryza rufipogon	44.22	1.00e-67	248.00
IUUC-Pop-099762	Populus trichocarpa	54.75	9.00e-95	339.00
IUUC-Ppe-101222	Prunus persica	51.87	4.00e-58	217.00
IUUC-Sit-110260	Setaria italica	42.56	4.00e-64	237.00
IUUC-Stu-112000	Solanum tuberosum	45.81	2.00e-77	281.00
IUUC-Sbi-114097	Sorghum bicolor	43.42	4.00e-71	260.00
IUUC-Tca-121403	Theobroma cacao	58.28	4.00e-97	347.00
IUUC-Tae-122702	Triticum aestivum	44.75	6.00e-69	253.00
IUUC-Tur-126104	Triticum urartu	43.94	2.00e-68	251.00
IUUC-Vvi-131179	Vitis vinifera	50.16	2.00e-87	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence