iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006534

Ensembl Protein ID

fgenesh1_pg.C_scaffold_3000780

UniProt Accession

D7L778; D7L778_ARALL

Genbank Protein ID

EFH58842.1

Protein Name

VHS domain-containing protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_341017

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_3000780	fgenesh1_pg.C_scaffold_3000780	fgenesh1_pg.C_scaffold_3000780

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/GAT	30.50	2.00e-13	72.40	IUUC-Sce-106409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVHPLVDRAT SDMLIGPDWA MNLEICDMLN HEPGQTREVV SGIKKRLTSR TSKVQLLALT 60
LLETIINNCG ELIHMQVAEK DILHKMVKMA KRKPNIQVKE KILILIDTWQ ESFSGPQGRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGCATC CTTTGGTTGA TAGAGCCACA AGCGATATGC TCATTGGTCC TGATTGGGCC 60
ATGAACCTCG AGATATGTGA CATGCTTAAT CATGAGCCTG GGTAAGACCT TTTTTTACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport

KEGG

aly:ARALYDRAFT_341017

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007264	Arabidopsis thaliana	94.10	0.00e+00	950.00
IUUC-Ago-007767	Ashbya gossypii	23.18	5.00e-16	78.60
IUUC-Acl-008046	Aspergillus clavatus	32.43	1.00e-14	74.30
IUUC-Afl-008621	Aspergillus flavus	33.33	8.00e-15	74.70
IUUC-Bol-015614	Brassica oleracea	78.54	0.00e+00	810.00
IUUC-Bra-016712	Brassica rapa	76.67	0.00e+00	811.00
IUUC-Cgl-026648	Colletotrichum gloeosporioides	34.55	3.00e-15	76.30
IUUC-Fox-037748	Fusarium oxysporum	30.63	2.00e-15	76.60
IUUC-Fso-038126	Fusarium solani	29.09	4.00e-14	72.40
IUUC-Ggr-040048	Gaeumannomyces graminis	32.73	8.00e-16	78.20
IUUC-Mpo-057476	Magnaporthe poae	32.73	7.00e-16	78.60
IUUC-Mvi-060415	Microbotryum violaceum	29.08	1.00e-12	67.40
IUUC-Olu-087840	Ostreococcus lucimarinus	26.53	2.00e-14	73.60
IUUC-Sce-106409	Saccharomyces cerevisiae	30.50	3.00e-14	72.80
IUUC-Sja-107801	Schizosaccharomyces japonicus	33.02	5.00e-13	68.60
IUUC-Spo-108179	Schizosaccharomyces pombe	24.62	7.00e-14	71.60
IUUC-Tca-121503	Theobroma cacao	47.95	1.00e-140	493.00
IUUC-Tre-122061	Trichoderma reesei	34.26	2.00e-16	79.70
IUUC-Tvi-122365	Trichoderma virens	32.43	1.00e-15	77.40
IUUC-Tbe-127374	Tupaia belangeri	25.62	3.00e-07	49.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence