iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016368

Ensembl Protein ID

Bo3g172320.1

UniProt Accession

A0A0D3BLT9; A0A0D3BLT9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g172320	Bo3g172320.1	Bo3g172320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-24	84.1	621	653
UBD/Beta-Prp	3.60e-47	162.5	615	749

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
            t++vtc++f sd ++l+s+++D++  +W ++t
   Q: 621  STSKVTCCHFsSDgKMLASAGHDKKAVLWHTDT 653
           5899*******999***************8766 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           + s+   +++vt++ fs+dgk+l++++ D+ + +w  +t k+  tl++h+++++++++sps  +l++ s d+t+rvwd +++  +  t+ gh+++v+
   Q: 615  VNSVRASTSKVTCCHFSSDGKMLASAGHDKKAVLWHTDTMKPKTTLEEHTAMITDVRYSPSLPRLATSSFDKTVRVWDADNKGYSIRTFMGHSSMVT 711
           5666667777999999999999999999999999999999999999999999999999999999999999999999998876554459999999999 PP
   S: 142  cvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgg 178
           ++ +hp++ +l+ s+ +D+ +r W++++g+  r  +gg
   Q: 712  SLDFHPNKdDLICSCDTDGEIRYWSINNGSYTRVYKGG 749
           99999999999999999999999999999988888775 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL VKRDLKATAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQMIKAREQQ LQQSQHPQIS QQQQQIQMQQ LLLQRAQQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTGAGTTT TTGATTTCCC CTCACTGATA 60
CACTCTGCTT CTTGCTAATT TTGAGCTGGG TTTTAAGATT CTGTTCGTTC TTGAAGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017481	Brassica rapa	97.15	0.00e+00	1286.00
IUUC-Hvu-047499	Hordeum vulgare	64.45	2.00e-152	531.00
IUUC-Oba-075419	Oryza barthii	56.18	0.00e+00	666.00
IUUC-Obr-076118	Oryza brachyantha	59.07	0.00e+00	723.00
IUUC-Ogl-077064	Oryza glaberrima	59.01	0.00e+00	735.00
IUUC-Ogu-078816	Oryza glumaepatula	55.78	0.00e+00	651.00
IUUC-Oni-082753	Oryza nivara	56.32	0.00e+00	671.00
IUUC-Opu-083283	Oryza punctata	54.97	0.00e+00	642.00
IUUC-Oru-084538	Oryza rufipogon	56.32	0.00e+00	665.00
IUUC-Osa-086142	Oryza sativa	59.27	0.00e+00	738.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence