iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051536

Ensembl Protein ID

LPERR01G19030.2

UniProt Accession

A0A0D9V2R7; A0A0D9V2R7_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G19030	LPERR01G19030.1	LPERR01G19030.1
LPERR01G19030	LPERR01G19030.2	LPERR01G19030.2
LPERR01G19030	LPERR01G19030.3	LPERR01G19030.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-21	76.1	623	652
UBD/Beta-Prp	2.30e-40	139.5	580	861

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ +t+++f ++  +l+++s D+t++vWD
   Q: 623  HSALITDVRFsPSmSRLATSSFDKTVRVWD 652
           999********66799************** PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgk.cvhtlkghedsvlsl 100
           + ++ ++c +fs d++llatg+ d+++ +w +++ k  +sl++h+a +t+v+fsp+ + l+t+s D+t++vwd ++ +  ++t++gh++sv+sl
   Q: 580  ASTTKVSCCHFSSDGKLLATGGHDKKVLLWFTEPLKPKSSLEEHSALITDVRFSPSMSRLATSSFDKTVRVWDADNTDySLRTFTGHSASVMSL 673
           556778999*****************************************************************96662699************ PP
   S: 101  sfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng 192
           +f+p++ d + s + d  +r w +++g+cl  + ++ +g  + ++++p + ++l+++s  +++ + d +t+   r   +ght+ + sl +ds+g
   Q: 674  DFHPNKeDMICSCDGDGEVRSWSINNGSCLT-CVKVFKGGATQMRFQPRKgKYLAAAS-EKAIYILDGETQLACRNPLQGHTKNILSLCWDSTG 765
           ****888***********************9.****************9966666665.799999***999877776455************** PP
   S: 193  kelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlg 283
             l+s+s+d  v++w++     ge v++ln+  + + s  f+p   +l+s        +Wd+r ++ l+    h   v + a+ s    +++++
   Q: 766  DNLASVSED-CVRIWSFAsghDGEFVHELNCSGNKFHSCVFHPSYPFLLSL------ELWDIREKNALTIHGAHDGLVAALAA-SSATGKVASV 851
           ********9.59******8888899*****************999999887......6***********99999999999999.6667778999 PP
   S: 284  sedskvniwk 293
           s d++v++wk
   Q: 852  SHDKCVKLWK 861
           *********8 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYF MKRNLQATAK AFQAEGKVSS DPVARTNEKH SDVAASYIET 60
QHMKAREQQQ QQQQQQPPQQ RQQQPQHIQM QQMLLQRAAQ QQQQQQQQQQ QQQQHQQQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCAGA CGAACTGGGA GGCGGATAAG ATGTGAGGAT TTGTTCCCTT TGGTGTTTTT 60
TTTTTTTTTG TCGCCCGTGG ATTCATGCCG TGTTTTGGTG GGAGGTGGTT TGGTTTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	82.20	0.00e+00	971.00
IUUC-Atr-002973	Amborella trichopoda	63.30	0.00e+00	705.00
IUUC-Aly-006446	Arabidopsis lyrata	58.68	0.00e+00	722.00
IUUC-Ath-006594	Arabidopsis thaliana	56.02	0.00e+00	704.00
IUUC-Bdi-015034	Brachypodium distachyon	84.59	0.00e+00	1048.00
IUUC-Bol-015720	Brassica oleracea	57.60	0.00e+00	697.00
IUUC-Bra-017481	Brassica rapa	56.72	0.00e+00	717.00
IUUC-Gma-043858	Glycine max	70.02	4.00e-155	541.00
IUUC-Hvu-047773	Hordeum vulgare	87.47	0.00e+00	660.00
IUUC-Mtr-058613	Medicago truncatula	58.65	0.00e+00	720.00
IUUC-Oba-075753	Oryza barthii	84.28	0.00e+00	944.00
IUUC-Obr-076415	Oryza brachyantha	91.83	0.00e+00	1126.00
IUUC-Ogl-077031	Oryza glaberrima	91.96	0.00e+00	1105.00
IUUC-Ogu-078070	Oryza glumaepatula	84.28	0.00e+00	945.00
IUUC-Oin-079642	Oryza indica	92.10	0.00e+00	1106.00
IUUC-Olo-080338	Oryza longistaminata	92.88	0.00e+00	1009.00
IUUC-Ome-081901	Oryza meridionalis	92.72	0.00e+00	1103.00
IUUC-Oni-082450	Oryza nivara	84.28	0.00e+00	945.00
IUUC-Opu-083133	Oryza punctata	82.78	1.00e-171	596.00
IUUC-Oru-085189	Oryza rufipogon	86.24	0.00e+00	993.00
IUUC-Osa-085738	Oryza sativa	91.96	0.00e+00	1104.00
IUUC-Pop-098994	Populus trichocarpa	62.30	0.00e+00	743.00
IUUC-Ppe-102018	Prunus persica	58.78	0.00e+00	708.00
IUUC-Smo-109607	Selaginella moellendorffii	51.57	8.00e-168	583.00
IUUC-Sit-109866	Setaria italica	85.14	0.00e+00	1048.00
IUUC-Sly-110921	Solanum lycopersicum	60.87	0.00e+00	709.00
IUUC-Sbi-113848	Sorghum bicolor	84.17	0.00e+00	1016.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence