iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2444__AT1G22500.1	fgenesh2_kg.1__2444__AT1G22500.1	fgenesh2_kg.1__2444__AT1G22500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	32.7	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++ p C Hvfh  C+++w       + + +CPlCr
   Q: 119  CPVCLNEFedDESLRLIPqCCHVFHPGCIEAW------LRSQTTCPLCR 161
           ********65444888889*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVVMSRLSFY SSFVLLLLQL AVAQTEFAND GGRTNISPSM VILMIVLVSV FFGIGCISVS 60
MRSCIERATG LGGYSRQGNW RNVRQTTARG LDASVIETFP TFRYSTVKTL RIGKEALECP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTTATAA AGCTCTTTCA CCGGCAAATT GGTCCTCATG AAACCGGGAA GTCCAATTAC 60
TTACCTCCAC CGTCAAATCG TTAAACCATT TGCAACCATC GATGGTGGTC ATGTCACGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033591--P:response to L-ascorbic acid
GO:0009416--P:response to light stimulus

KEGG

aly:ARALYDRAFT_472490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007432	Arabidopsis thaliana	83.33	1.00e-175	608.00
IUUC-Afu-009087	Aspergillus fumigatus	37.78	1.00e-12	65.90
IUUC-Bol-015608	Brassica oleracea	73.96	1.00e-160	558.00
IUUC-Bra-017466	Brassica rapa	76.70	9.00e-158	548.00
IUUC-Sly-111277	Solanum lycopersicum	39.06	2.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence