iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012902

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02014587

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000020472.5	ENSBTAT00000027280.5	ENSBTAP00000027280.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.80e-19	67.8	295	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC +Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 295  VCMFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 342
           8*********88.6*******************.*******7.******75 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAGVGPGGYA AEFVPPPECP VFEPSWEEFT DPLSFIGRIR PMAEKTGICK IRPPKDWQPP 60
FACEVKSFRF TPRVQRLNEL EAMTRVRLDF LDQLAKFWEL QGSTLKIPVV ERKILDLYAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGCG TGGGGCCGGG GGGCTACGCG GCGGAGTTCG TGCCGCCCCC GGAGTGCCCG 60
GTGTTTGAGC CCAGCTGGGA GGAGTTCACA GATCCGCTCA GCTTTATTGG CCGCATCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	97.93	0.00e+00	2946.00
IUUC-Atr-002595	Amborella trichopoda	30.88	3.00e-121	430.00
IUUC-Apl-004141	Anas platyrhynchos	91.10	0.00e+00	2759.00
IUUC-Aca-004952	Anolis carolinensis	89.44	0.00e+00	2788.00
IUUC-Aly-006097	Arabidopsis lyrata	63.64	4.00e-09	58.50
IUUC-Ath-007218	Arabidopsis thaliana	63.64	6.00e-09	58.20
IUUC-Acl-008162	Aspergillus clavatus	30.97	2.00e-120	427.00
IUUC-Ate-010453	Aspergillus terreus	29.25	2.00e-115	411.00
IUUC-Ame-011323	Astyanax mexicanus	76.16	0.00e+00	2023.00
IUUC-Bgr-012241	Blumeria graminis	29.83	9.00e-112	399.00
IUUC-Bdi-014050	Brachypodium distachyon	30.68	1.00e-118	421.00
IUUC-Cja-018988	Callithrix jacchus	95.63	0.00e+00	2759.00
IUUC-Cfa-020212	Canis familiaris	96.87	0.00e+00	2904.00
IUUC-Cpo-022221	Cavia porcellus	96.43	0.00e+00	2058.00
IUUC-Csa-023575	Chlorocebus sabaeus	97.72	0.00e+00	2857.00
IUUC-Cho-024280	Choloepus hoffmanni	92.20	0.00e+00	2705.00
IUUC-Cin-025321	Ciona intestinalis	48.64	0.00e+00	1058.00
IUUC-Csv-026185	Ciona savignyi	47.69	0.00e+00	1148.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	28.42	4.00e-109	390.00
IUUC-Dre-027909	Danio rerio	75.59	0.00e+00	1631.00
IUUC-Dno-029473	Dasypus novemcinctus	97.02	0.00e+00	2692.00
IUUC-Dor-030281	Dipodomys ordii	94.97	0.00e+00	1216.00
IUUC-Dme-032021	Drosophila melanogaster	47.27	0.00e+00	1104.00
IUUC-Eca-034265	Equus caballus	96.70	0.00e+00	2954.00
IUUC-Fca-035476	Felis catus	96.87	0.00e+00	2940.00
IUUC-Fal-037078	Ficedula albicollis	91.16	0.00e+00	2478.00
IUUC-Ggr-039929	Gaeumannomyces graminis	30.18	2.00e-107	384.00
IUUC-Gga-040466	Gallus gallus	89.82	0.00e+00	2838.00
IUUC-Gac-042566	Gasterosteus aculeatus	75.17	0.00e+00	2089.00
IUUC-Ggo-044524	Gorilla gorilla	90.78	0.00e+00	2496.00
IUUC-Hsa-045821	Homo sapiens	97.46	0.00e+00	2970.00
IUUC-Kpa-049245	Komagataella pastoris	22.84	3.00e-40	161.00
IUUC-Lch-050630	Latimeria chalumnae	74.03	0.00e+00	2081.00
IUUC-Loc-051963	Lepisosteus oculatus	75.67	0.00e+00	2037.00
IUUC-Laf-053918	Loxodonta africana	90.55	0.00e+00	2566.00
IUUC-Mcc-055672	Macaca mulatta	96.33	0.00e+00	2957.00
IUUC-Mor-057198	Magnaporthe oryzae	30.71	6.00e-118	419.00
IUUC-Mpo-057317	Magnaporthe poae	30.58	3.00e-108	387.00
IUUC-Mga-059192	Meleagris gallopavo	81.96	0.00e+00	2388.00
IUUC-Mmr-060968	Microcebus murinus	95.63	0.00e+00	2958.00
IUUC-Mdo-062945	Monodelphis domestica	94.84	0.00e+00	2774.00
IUUC-Mmu-063614	Mus musculus	95.39	0.00e+00	2920.00
IUUC-Mpu-066349	Mustela putorius furo	97.86	0.00e+00	2856.00
IUUC-Mlu-067363	Myotis lucifugus	97.52	0.00e+00	3007.00
IUUC-Nle-070142	Nomascus leucogenys	97.40	0.00e+00	2978.00
IUUC-Opr-071002	Ochotona princeps	90.10	0.00e+00	1380.00
IUUC-Ont-072471	Oreochromis niloticus	77.57	0.00e+00	1850.00
IUUC-Oan-072797	Ornithorhynchus anatinus	79.39	0.00e+00	2011.00
IUUC-Ocu-074164	Oryctolagus cuniculus	96.10	0.00e+00	3006.00
IUUC-Oba-075388	Oryza barthii	33.33	1.00e-80	295.00
IUUC-Obr-076296	Oryza brachyantha	30.86	3.00e-95	344.00
IUUC-Ogu-079040	Oryza glumaepatula	27.54	4.00e-81	297.00
IUUC-Ome-081764	Oryza meridionalis	29.42	5.00e-99	356.00
IUUC-Oni-083012	Oryza nivara	27.44	2.00e-80	295.00
IUUC-Oru-084630	Oryza rufipogon	27.23	3.00e-80	294.00
IUUC-Ola-087076	Oryzias latipes	74.66	0.00e+00	2076.00
IUUC-Oga-088350	Otolemur garnettii	94.92	0.00e+00	2869.00
IUUC-Oar-090045	Ovis aries	99.47	0.00e+00	3046.00
IUUC-Ptr-091199	Pan troglodytes	96.99	0.00e+00	2959.00
IUUC-Pan-092094	Papio anubis	92.98	0.00e+00	2883.00
IUUC-Psi-093550	Pelodiscus sinensis	90.43	0.00e+00	2727.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.40	2.00e-116	414.00
IUUC-Ppa-095839	Physcomitrella patens	34.40	1.00e-15	80.10
IUUC-Pfo-097266	Poecilia formosa	77.61	0.00e+00	1826.00
IUUC-Pab-098576	Pongo abelii	97.64	0.00e+00	2966.00
IUUC-Pca-100123	Procavia capensis	93.04	0.00e+00	1629.00
IUUC-Pva-103109	Pteropus vampyrus	91.79	0.00e+00	2786.00
IUUC-Pte-104195	Pyrenophora teres	29.64	9.00e-122	432.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.27	1.00e-123	438.00
IUUC-Rno-105664	Rattus norvegicus	95.45	0.00e+00	2919.00
IUUC-Sha-107506	Sarcophilus harrisii	92.95	0.00e+00	2518.00
IUUC-Spo-108283	Schizosaccharomyces pombe	22.68	1.00e-51	199.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	62.40
IUUC-Sit-110534	Setaria italica	29.53	1.00e-118	422.00
IUUC-Sar-113052	Sorex araneus	96.28	0.00e+00	2928.00
IUUC-Tgu-116613	Taeniopygia guttata	90.07	0.00e+00	2779.00
IUUC-Tru-118604	Takifugu rubripes	74.81	0.00e+00	2128.00
IUUC-Tsy-119237	Tarsius syrichta	97.32	0.00e+00	1294.00
IUUC-Tni-120779	Tetraodon nigroviridis	74.39	0.00e+00	2104.00
IUUC-Tre-122213	Trichoderma reesei	29.29	5.00e-111	396.00
IUUC-Tvi-122263	Trichoderma virens	29.12	6.00e-110	392.00
IUUC-Tae-125894	Triticum aestivum	29.61	2.00e-111	398.00
IUUC-Tme-127087	Tuber melanosporum	31.00	6.00e-131	462.00
IUUC-Tbe-127627	Tupaia belangeri	98.24	0.00e+00	800.00
IUUC-Ttr-129242	Tursiops truncatus	96.34	0.00e+00	2896.00
IUUC-Vda-129733	Verticillium dahliae	28.85	4.00e-102	367.00
IUUC-Vpa-130429	Vicugna pacos	90.09	0.00e+00	1457.00
IUUC-Xtr-131762	Xenopus tropicalis	76.19	0.00e+00	2217.00
IUUC-Xma-133693	Xiphophorus maculatus	77.38	0.00e+00	1843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence