• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Dre-028370
Ensembl Protein ID ENSDARP00000133609.1
UniProt Accession A0A0G2KML8; A0A0G2KML8_DANRE
Genbank Protein ID ENSDARP00000133609
Protein Name WD repeat domain 48a
Genbank Nucleotide ID CABZ01090140
Gene Name wdr48a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000102734.1 ENSDART00000158642.1 ENSDARP00000133609.1
ENSDARG00000102734.1 ENSDART00000170688.1 ENSDARP00000131869.1
ENSDARG00000102734.1 ENSDART00000165001.1 ENSDARP00000130508.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.90e-33 113.4 193 230
UBD/Beta-Prp 4.50e-48 164.9 17 314
ULD/UDP/UFD/RAWUL 3.40e-23 82.9 577 682
ULD/UBL/SUMO 2.00e-42 144.7 568 675
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    gHtd v +l + d t +sGs Dgti++W+l +++++
   Q: 193 GHTDNVKSLLLnRDgTQCLSGSSDGTIRLWSLGQQRCI 230
    8********88*888*****************999997 PP
   


   UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
    + +++++ p + l+t++rd+ i++w+v + k ++s++ h++ v+++ + +gk+l+++s+D t+kvw+ +g c++tl+ h+d+v
   Q: 17 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDpyIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV 105
    55677888888999****************998788***************************************************** PP
   S: 98 lslsfspsgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
    +l++ ++++ ++s++ dr i +wd++t + l + lsg+++++ ++++++ g ++vsGs+ +++r+Wd +t l +l+g
   Q: 106 KALAYAKDKELVASAGLDRQIFLWDVNTLTALTAsnntvttsSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKG- 193
    ********************************99*********************************************99999**99. PP
   S: 179 htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssv 267
    htd v+sl ++++g++++sgs dgt++lw+l +++c+ t++ h++ v+ +++ + ++++sg+ D+ i++ dlr+ d+ + ++ v
   Q: 194 HTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPV 282
    *****************************************************************************999999999777 PP
   S: 268 isvav...lsfgdnvlvlgsedskvniwklkkn 297
    ++ + ++ + + v+ + s+vn w+lk +
   Q: 283 LKMELdrsADPHNAIWVS-TTKSTVNKWSLKGI 314
    777775433343444444.44477777777654 PP
   


   ULD/UDP/UFD/RAWUL

   S: 4    sLeplesnkakddsklkkkylrcsarltVkhlkkflaeklkl...sssy..........................evdllcedevLedn 63
    L+p++s++ak+ lkk++l++s++l+V++++++++ek+++ + +++llc+d+vL++n
   Q: 577 YLQPHSSSGAKT---LKKDRLSASDMLQVRKVMEHVYEKIINldsE--SqtggsaaekpsseqkedeemavqaeeKIELLCQDQVLDPN 660
    69**********...*************************998762..234666677777778888888999999************** PP
   S: 64 etLeeikyifiwkkegpLvLqYr 86
    ++L+++ ++fiwk++g+L+L+Yr
   Q: 661 MDLRTV-KHFIWKSGGDLTLHYR 682
    ******.***************9 PP
   


   ULD/UBL/SUMO

   S: 1    eskffkapvslkvagqdGsevlfklklsa....qlkklmeavYvkrinldensvrfvfngqkireq.etpeelevededkiellcq... 81
    ++kf+k+p++l++++++G+++l+k++lsa q++k+me+vY+k+inld +s++ + +k++ + + +ee++v++e+kiellcq
   Q: 568 MPKFNKIPFYLQPHSSSGAKTLKKDRLSAsdmlQVRKVMEHVYEKIINLDSESQTGGSAAEKPSSEqKEDEEMAVQAEEKIELLCQdqv 656
    8*******************************************************9776666655055689**************777 PP
   S: 82 ...............ksGG 85
    ksGG
   Q: 657 ldpnmdlrtvkhfiwKSGG 675
    7777777777777777776 PP
   

Organism Danio rerio
Protein Sequence
(Fasta)
XQVSYVIRDE VEKYNRNGVN ALQLDPALNR LFTAGRDSII RIWSVNQHKD PYIASMEHHT 60
DWVNDIVLCC NGKTLISASS DTTVKVWNAH KGFCMSTLRT HKDYVKALAY AKDKELVASA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Dre-028370|E3,WD_repeat;UBD,Beta-Prp;ULD,RAWUL;ULD,SUMO|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCGTCAACA TGTAAGATGG CGACGCATCA CAGGCAGAAT GCAGCGGGGC GCAGGAAAGT 60
GCAGGTAACT CTTTGACTCT TTCGTGTTTT CTGGTAATGT GCGTGTGTAT TTTTCGTGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Dre-028370|E3,WD_repeat;UBD,Beta-Prp;ULD,RAWUL;ULD,SUMO|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003009 Amborella trichopoda 33.64 5.00e-111 395.00
IUUC-Apl-003709 Anas platyrhynchos 96.21 0.00e+00 644.00
IUUC-Aly-005464 Arabidopsis lyrata 40.00 2.00e-93 337.00
IUUC-Ath-006969 Arabidopsis thaliana 39.84 1.00e-89 324.00
IUUC-Acl-008203 Aspergillus clavatus 33.51 1.00e-47 185.00
IUUC-Afl-008571 Aspergillus flavus 35.03 3.00e-46 180.00
IUUC-Afu-009072 Aspergillus fumigatus 35.03 7.00e-45 176.00
IUUC-Ani-009413 Aspergillus nidulans 35.75 1.00e-47 185.00
IUUC-Ang-009571 Aspergillus niger 27.99 2.00e-45 178.00
IUUC-Aor-010064 Aspergillus oryzae 35.03 2.00e-46 181.00
IUUC-Ate-010463 Aspergillus terreus 35.03 3.00e-46 180.00
IUUC-Bci-013859 Botrytis cinerea 32.73 3.00e-41 164.00
IUUC-Bdi-014645 Brachypodium distachyon 33.68 1.00e-111 397.00
IUUC-Cel-018656 Caenorhabditis elegans 42.66 8.00e-155 540.00
IUUC-Cre-022779 Chlamydomonas reinhardtii 29.47 5.00e-41 163.00
IUUC-Cgl-026540 Colletotrichum gloeosporioides 26.63 8.00e-20 92.80
IUUC-Eeu-034894 Erinaceus europaeus 93.23 0.00e+00 818.00
IUUC-Fox-037907 Fusarium oxysporum 31.90 8.00e-41 162.00
IUUC-Fso-038101 Fusarium solani 32.76 2.00e-39 158.00
IUUC-Ggr-039995 Gaeumannomyces graminis 30.42 1.00e-40 162.00
IUUC-Gma-043089 Glycine max 33.20 4.00e-109 389.00
IUUC-Hvu-047730 Hordeum vulgare 33.86 7.00e-83 301.00
IUUC-Lpe-051608 Leersia perrieri 34.05 1.00e-109 390.00
IUUC-Lma-053025 Leptosphaeria maculans 35.74 2.00e-48 187.00
IUUC-Mor-057284 Magnaporthe oryzae 33.23 5.00e-42 167.00
IUUC-Mpo-057418 Magnaporthe poae 30.23 7.00e-40 159.00
IUUC-Mla-059101 Melampsora laricipopulina 44.12 5.00e-45 177.00
IUUC-Mac-065434 Musa acuminata 34.06 1.00e-107 384.00
IUUC-Nfi-068416 Neosartorya fischeri 29.75 3.00e-56 213.00
IUUC-Ncr-068825 Neurospora crassa 30.43 3.00e-38 154.00
IUUC-Obr-076699 Oryza brachyantha 34.44 2.00e-110 393.00
IUUC-Ogu-078114 Oryza glumaepatula 34.11 3.00e-109 389.00
IUUC-Oin-079575 Oryza indica 34.62 7.00e-113 401.00
IUUC-Oru-084330 Oryza rufipogon 34.27 9.00e-110 391.00
IUUC-Osa-085408 Oryza sativa 34.62 7.00e-113 401.00
IUUC-Olu-087710 Ostreococcus lucimarinus 30.20 4.00e-79 289.00
IUUC-Pno-095085 Phaeosphaeria nodorum 34.39 1.00e-43 171.00
IUUC-Ppa-095594 Physcomitrella patens 34.93 1.00e-111 397.00
IUUC-Pop-099389 Populus trichocarpa 34.43 2.00e-109 389.00
IUUC-Ppe-102060 Prunus persica 33.55 3.00e-107 382.00
IUUC-Pte-104181 Pyrenophora teres 35.74 6.00e-48 186.00
IUUC-Pyt-104439 Pyrenophora triticirepentis 34.83 2.00e-47 185.00
IUUC-Sja-107716 Schizosaccharomyces japonicus 29.88 8.00e-58 219.00
IUUC-Spo-108325 Schizosaccharomyces pombe 30.53 5.00e-52 199.00
IUUC-Ssl-108542 Sclerotinia sclerotiorum 28.44 1.00e-43 171.00
IUUC-Smo-109427 Selaginella moellendorffii 35.17 2.00e-113 403.00
IUUC-Sit-110755 Setaria italica 35.04 8.00e-113 401.00
IUUC-Sbi-113789 Sorghum bicolor 34.12 3.00e-110 393.00
IUUC-Tre-122198 Trichoderma reesei 31.69 1.00e-41 165.00
IUUC-Tvi-122389 Trichoderma virens 32.56 1.00e-41 165.00
IUUC-Tme-126932 Tuber melanosporum 30.50 4.00e-53 203.00
IUUC-Vda-129925 Verticillium dahliae 34.51 4.00e-45 177.00
IUUC-Vvi-130995 Vitis vinifera 33.29 2.00e-106 380.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved