iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012296

Ensembl Protein ID

CCU76091

UniProt Accession

N1J7W2; N1J7W2_BLUG1

Genbank Protein ID

CCU76091.1

Protein Name

WD40 domain-containing protein

Genbank Nucleotide ID

CAUH01002155

Gene Name

BGHDH14_bgh03498

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh03498	CCU76091	CCU76091

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-38	128.0	611	649
UBD/Beta-Prp	4.60e-83	277.2	574	731

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v +l+   d +l+v++s D++i++W l+ g++ k
   Q: 611  GHKLPVLDLDIsFDsKLIVTCSADKNIRIWGLDFGDCHK 649
           677788887666455********************9975 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.....sgdk 108
           i ++ fspd++lla +  d+t+kv+ v++ kl+  l+gh+ +v ++++s d+k++vt+s D++i++w l+ g+c  ++ +h ds+l + f p     +g++
   Q: 574  ILSLRFSPDSRLLAISLLDNTVKVFFVDSLKLFLNLYGHKLPVLDLDISFDSKLIVTCSADKNIRIWGLDFGDCHKAFFAHHDSILKVGFVPhnqdgNGHH 674
           45599***************************************************************************************9999999** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           + s s+d++i+ wd ++ + ++  l++h+g ++ +vv+++g  +vs+s D+ +r+W  
   Q: 675  FFSCSKDKIIKYWDGDKFEQIQ-KLENHHGEIWALVVSKTGEFFVSASHDKSIRVWEQ 731
           **********************.9********************************86 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MVKSYLKYEQ SKVFGVVSSG TSNVLWYNET NASRTTGFGR AITAANEEVF CWDIKKGELL 60
SRWKDEGNNS RVTVIASSKS DQDVFAVGYE DGSIRIWDSK ISKVIVVFNG HRSAITSLQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTAAAT CTTACTTGTG AGTTTCAGAA AATATAGAGG GATAAGCTCA ATTAATAATT 60
TACATTCTAG AAAATATGAG CAGTCAAAAG TCTTTGGAGT TGTAAGTTCG GGCACTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	36.05	2.00e-127	448.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.24	5.00e-165	573.00
IUUC-Atr-002700	Amborella trichopoda	35.36	2.00e-147	514.00
IUUC-Apl-004164	Anas platyrhynchos	36.65	6.00e-128	449.00
IUUC-Aca-004765	Anolis carolinensis	36.37	8.00e-166	575.00
IUUC-Aly-006503	Arabidopsis lyrata	34.50	3.00e-145	507.00
IUUC-Ath-006848	Arabidopsis thaliana	35.05	9.00e-149	519.00
IUUC-Ago-007909	Ashbya gossypii	41.95	0.00e+00	714.00
IUUC-Acl-008238	Aspergillus clavatus	59.65	0.00e+00	1181.00
IUUC-Afl-008544	Aspergillus flavus	58.40	0.00e+00	1159.00
IUUC-Afu-008868	Aspergillus fumigatus	59.45	0.00e+00	1181.00
IUUC-Ani-009367	Aspergillus nidulans	58.30	0.00e+00	1135.00
IUUC-Ang-009732	Aspergillus niger	58.78	0.00e+00	1177.00
IUUC-Aor-010140	Aspergillus oryzae	58.79	0.00e+00	1169.00
IUUC-Ate-010572	Aspergillus terreus	56.89	0.00e+00	1131.00
IUUC-Ame-010956	Astyanax mexicanus	42.63	4.00e-126	443.00
IUUC-Bta-012716	Bos taurus	37.35	1.00e-169	588.00
IUUC-Bci-013699	Botrytis cinerea	67.42	0.00e+00	1228.00
IUUC-Bdi-014525	Brachypodium distachyon	35.23	8.00e-143	499.00
IUUC-Bol-015117	Brassica oleracea	35.92	2.00e-149	521.00
IUUC-Bra-016869	Brassica rapa	36.24	4.00e-152	530.00
IUUC-Cel-018570	Caenorhabditis elegans	27.65	3.00e-94	337.00
IUUC-Cja-019425	Callithrix jacchus	36.48	7.00e-170	589.00
IUUC-Cfa-020787	Canis familiaris	37.76	2.00e-166	577.00
IUUC-Cpo-021729	Cavia porcellus	38.11	1.00e-128	451.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	40.11	1.00e-99	355.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.45	2.00e-173	600.00
IUUC-Cho-024495	Choloepus hoffmanni	38.38	3.00e-95	340.00
IUUC-Cin-025245	Ciona intestinalis	34.52	1.00e-94	338.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	64.05	0.00e+00	1181.00
IUUC-Cne-026835	Cryptococcus neoformans	39.32	0.00e+00	630.00
IUUC-Cme-027162	Cyanidioschyzon merolae	25.48	2.00e-52	199.00
IUUC-Dre-027874	Danio rerio	37.04	3.00e-172	597.00
IUUC-Dno-028905	Dasypus novemcinctus	37.15	2.00e-167	581.00
IUUC-Dor-030383	Dipodomys ordii	31.15	3.00e-60	225.00
IUUC-Dse-031297	Dothistroma septosporum	51.74	0.00e+00	1001.00
IUUC-Dme-031956	Drosophila melanogaster	31.02	2.00e-125	441.00
IUUC-Ete-032608	Echinops telfairi	33.33	4.00e-88	316.00
IUUC-Eca-034181	Equus caballus	37.53	4.00e-166	577.00
IUUC-Eeu-034495	Erinaceus europaeus	38.35	2.00e-164	570.00
IUUC-Fca-035994	Felis catus	38.56	8.00e-159	552.00
IUUC-Fal-036611	Ficedula albicollis	36.09	4.00e-162	563.00
IUUC-Fox-037807	Fusarium oxysporum	62.44	0.00e+00	1199.00
IUUC-Fso-038090	Fusarium solani	62.75	0.00e+00	1188.00
IUUC-Gmo-039018	Gadus morhua	32.50	4.00e-80	290.00
IUUC-Ggr-039748	Gaeumannomyces graminis	61.38	0.00e+00	1196.00
IUUC-Gga-040707	Gallus gallus	40.07	3.00e-124	437.00
IUUC-Gac-042334	Gasterosteus aculeatus	35.46	1.00e-37	149.00
IUUC-Gma-043860	Glycine max	34.64	4.00e-141	493.00
IUUC-Ggo-045334	Gorilla gorilla	37.26	7.00e-170	589.00
IUUC-Hsa-046996	Homo sapiens	37.46	6.00e-170	589.00
IUUC-Hvu-047381	Hordeum vulgare	33.28	5.00e-79	286.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	36.81	5.00e-162	563.00
IUUC-Kpa-049185	Komagataella pastoris	39.25	0.00e+00	667.00
IUUC-Lch-050098	Latimeria chalumnae	35.26	1.00e-150	525.00
IUUC-Lpe-050710	Leersia perrieri	33.30	3.00e-137	481.00
IUUC-Loc-052745	Lepisosteus oculatus	37.60	1.00e-165	575.00
IUUC-Lma-053104	Leptosphaeria maculans	58.51	0.00e+00	1125.00
IUUC-Laf-054395	Loxodonta africana	37.35	7.00e-169	585.00
IUUC-Mcc-055077	Macaca mulatta	37.65	3.00e-171	593.00
IUUC-Meu-056418	Macropus eugenii	40.92	1.00e-93	336.00
IUUC-Mor-057031	Magnaporthe oryzae	61.50	0.00e+00	1098.00
IUUC-Mpo-057420	Magnaporthe poae	62.22	0.00e+00	1195.00
IUUC-Mtr-057838	Medicago truncatula	34.83	2.00e-153	534.00
IUUC-Mla-058854	Melampsora laricipopulina	38.52	0.00e+00	632.00
IUUC-Mga-060120	Meleagris gallopavo	38.17	4.00e-123	434.00
IUUC-Mvi-060407	Microbotryum violaceum	43.26	0.00e+00	758.00
IUUC-Mmr-060635	Microcebus murinus	37.30	2.00e-164	571.00
IUUC-Mdo-063023	Monodelphis domestica	37.12	7.00e-169	585.00
IUUC-Mmu-064103	Mus musculus	37.56	2.00e-174	604.00
IUUC-Mac-065569	Musa acuminata	34.77	2.00e-147	514.00
IUUC-Mpu-066462	Mustela putorius furo	37.67	1.00e-166	578.00
IUUC-Mlu-067894	Myotis lucifugus	37.83	3.00e-168	583.00
IUUC-Nfi-068321	Neosartorya fischeri	59.63	0.00e+00	1155.00
IUUC-Ncr-068661	Neurospora crassa	62.16	0.00e+00	1180.00
IUUC-Nle-069409	Nomascus leucogenys	37.33	3.00e-172	597.00
IUUC-Opr-070445	Ochotona princeps	40.83	1.00e-119	422.00
IUUC-Ont-072339	Oreochromis niloticus	37.22	5.00e-167	579.00
IUUC-Oan-073688	Ornithorhynchus anatinus	36.47	2.00e-158	550.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.35	2.00e-166	577.00
IUUC-Oba-075635	Oryza barthii	34.09	1.00e-135	475.00
IUUC-Obr-076897	Oryza brachyantha	35.20	1.00e-141	495.00
IUUC-Ogl-077555	Oryza glaberrima	33.98	3.00e-135	474.00
IUUC-Ogu-078724	Oryza glumaepatula	34.09	4.00e-136	477.00
IUUC-Oin-080030	Oryza indica	34.19	2.00e-134	471.00
IUUC-Olo-080687	Oryza longistaminata	32.31	8.00e-123	432.00
IUUC-Ome-081867	Oryza meridionalis	34.09	3.00e-135	474.00
IUUC-Oni-082559	Oryza nivara	34.09	1.00e-134	471.00
IUUC-Opu-083332	Oryza punctata	36.83	5.00e-128	449.00
IUUC-Oru-084455	Oryza rufipogon	34.09	5.00e-134	469.00
IUUC-Osa-085793	Oryza sativa	34.09	5.00e-134	469.00
IUUC-Ola-087395	Oryzias latipes	42.06	5.00e-117	413.00
IUUC-Olu-087768	Ostreococcus lucimarinus	35.80	2.00e-139	487.00
IUUC-Oga-088574	Otolemur garnettii	37.60	1.00e-169	588.00
IUUC-Oar-089453	Ovis aries	37.37	3.00e-169	587.00
IUUC-Ptr-090694	Pan troglodytes	37.46	1.00e-169	588.00
IUUC-Pan-092420	Papio anubis	37.35	1.00e-170	592.00
IUUC-Psi-093683	Pelodiscus sinensis	36.06	2.00e-161	561.00
IUUC-Pma-094197	Petromyzon marinus	33.86	4.00e-32	129.00
IUUC-Pno-094783	Phaeosphaeria nodorum	55.54	0.00e+00	1078.00
IUUC-Ppa-095208	Physcomitrella patens	39.08	2.00e-105	375.00
IUUC-Pfo-096299	Poecilia formosa	37.32	2.00e-172	597.00
IUUC-Pab-098706	Pongo abelii	37.39	1.00e-171	595.00
IUUC-Pop-099275	Populus trichocarpa	33.96	4.00e-140	490.00
IUUC-Pca-100796	Procavia capensis	30.06	2.00e-97	348.00
IUUC-Ppe-101861	Prunus persica	35.45	9.00e-144	502.00
IUUC-Pva-103241	Pteropus vampyrus	35.02	4.00e-151	526.00
IUUC-Pgr-103432	Puccinia graminis	40.54	0.00e+00	671.00
IUUC-Ptt-103742	Puccinia triticina	38.67	1.00e-176	612.00
IUUC-Pte-104069	Pyrenophora teres	58.65	0.00e+00	1084.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	58.54	0.00e+00	1109.00
IUUC-Rno-105219	Rattus norvegicus	37.46	6.00e-168	582.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.53	0.00e+00	721.00
IUUC-Sha-107550	Sarcophilus harrisii	36.42	1.00e-165	575.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	42.48	0.00e+00	729.00
IUUC-Spo-108239	Schizosaccharomyces pombe	42.90	0.00e+00	775.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	68.45	0.00e+00	1275.00
IUUC-Smo-109477	Selaginella moellendorffii	34.96	1.00e-148	518.00
IUUC-Sit-110000	Setaria italica	34.83	6.00e-131	459.00
IUUC-Sly-111595	Solanum lycopersicum	35.20	2.00e-148	518.00
IUUC-Stu-112516	Solanum tuberosum	34.68	4.00e-145	506.00
IUUC-Sar-113195	Sorex araneus	41.98	2.00e-112	398.00
IUUC-Sbi-114465	Sorghum bicolor	34.70	1.00e-141	495.00
IUUC-Sre-115006	Sporisorium reilianum	38.36	0.00e+00	680.00
IUUC-Ssc-115929	Sus scrofa	36.54	3.00e-163	566.00
IUUC-Tgu-117282	Taeniopygia guttata	36.50	7.00e-162	562.00
IUUC-Tru-118406	Takifugu rubripes	37.04	2.00e-161	560.00
IUUC-Tsy-119170	Tarsius syrichta	36.89	8.00e-164	568.00
IUUC-Tni-119721	Tetraodon nigroviridis	42.63	4.00e-123	434.00
IUUC-Tca-121761	Theobroma cacao	35.14	6.00e-152	529.00
IUUC-Tre-121908	Trichoderma reesei	62.97	0.00e+00	1164.00
IUUC-Tvi-122547	Trichoderma virens	63.12	0.00e+00	1157.00
IUUC-Tae-125496	Triticum aestivum	36.05	1.00e-137	481.00
IUUC-Tur-126811	Triticum urartu	36.82	2.00e-136	477.00
IUUC-Tme-126987	Tuber melanosporum	55.10	0.00e+00	1059.00
IUUC-Tbe-127315	Tupaia belangeri	44.15	9.00e-108	382.00
IUUC-Ttr-129165	Tursiops truncatus	42.32	5.00e-66	244.00
IUUC-Uma-129651	Ustilago maydis	39.48	0.00e+00	693.00
IUUC-Vda-129973	Verticillium dahliae	64.25	0.00e+00	1172.00
IUUC-Vpa-130163	Vicugna pacos	38.34	2.00e-52	199.00
IUUC-Vvi-131402	Vitis vinifera	35.21	5.00e-148	516.00
IUUC-Xtr-132296	Xenopus tropicalis	36.02	4.00e-165	573.00
IUUC-Xma-133028	Xiphophorus maculatus	37.22	7.00e-173	599.00
IUUC-Yli-134484	Yarrowia lipolytica	43.31	0.00e+00	741.00
IUUC-Zma-135938	Zea mays	34.25	2.00e-139	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence