iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111595

Ensembl Protein ID

Solyc10g039190.1.1

UniProt Accession

K4CZE3; K4CZE3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g039190.1	Solyc10g039190.1.1	Solyc10g039190.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-47	157.2	578	617
UBD/Beta-Prp	1.40e-121	406.1	538	710

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v c++  sd +llvsGs D+++k+W l+ g++ ks
   Q: 578  GHKLPVLCMDIsSDgDLLVSGSADKNVKIWGLDFGDCHKS 617
           7999********999*********************9875 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
            + + +v+ spd++++a++  d+t+kv+ +++ k++ sl+gh+ +v ++++s+dg++lv+gs D+++k+w l+ g+c  +l +h dsv+ +
   Q: 538  NDDVLVVAASPDGKFIAVALLDSTVKVYYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSADKNVKIWGLDFGDCHKSLFAHADSVMGV 628
           444555999********************************************************************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..........ktgkllr 173
           +f ++++++ + ++dr ++ wd ++ + l  tl+gh++ v+c++++  g+ +v+Gs Dr +r Wd           k ++l +
   Q: 629  KFVRNTHYFFTVGKDRLVKYWDADKFELLL-TLEGHHAEVWCLAMSNRGDFIVTGSHDRSIRRWDRtdepffieeeKEKRLEE 710
           ******************************.**********************************977777766654444444 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVKAYLRYEP AASFGVIVSG ESNIVYDSSG KHLLAAALEK IGIWHVRQGL CTKTLAPLPS 60
SDSKGPSLAV TSMASSSSSQ IASGYAEGSI RIWDSEKGIC ETTLNGHKGA VTALRYNKLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGG CATATCTCCG ATATGAGCCA GCGGCTTCTT TTGGGGTTAT AGTATCCGGG 60
GAATCAAATA TTGTCTATGA CAGCTCCGGC AAGCACTTGC TAGCGGCGGC GTTGGAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

sly:101257021

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	57.53	0.00e+00	934.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.64	1.00e-177	615.00
IUUC-Atr-002700	Amborella trichopoda	62.76	0.00e+00	1068.00
IUUC-Apl-004164	Anas platyrhynchos	41.33	7.00e-149	520.00
IUUC-Aca-004765	Anolis carolinensis	39.01	7.00e-180	623.00
IUUC-Aly-006503	Arabidopsis lyrata	68.13	0.00e+00	1193.00
IUUC-Ath-006848	Arabidopsis thaliana	67.84	0.00e+00	1201.00
IUUC-Ago-007909	Ashbya gossypii	34.09	3.00e-149	522.00
IUUC-Acl-008238	Aspergillus clavatus	37.54	2.00e-165	575.00
IUUC-Afl-008544	Aspergillus flavus	36.79	3.00e-159	555.00
IUUC-Afu-008868	Aspergillus fumigatus	37.36	1.00e-162	566.00
IUUC-Ani-009367	Aspergillus nidulans	38.45	4.00e-163	567.00
IUUC-Ang-009732	Aspergillus niger	37.85	3.00e-167	581.00
IUUC-Aor-010140	Aspergillus oryzae	36.81	1.00e-161	562.00
IUUC-Ate-010572	Aspergillus terreus	38.28	5.00e-163	568.00
IUUC-Ame-010956	Astyanax mexicanus	44.55	2.00e-124	439.00
IUUC-Bgr-012296	Blumeria graminis	35.20	3.00e-160	558.00
IUUC-Bta-012716	Bos taurus	38.45	0.00e+00	638.00
IUUC-Bci-013699	Botrytis cinerea	34.93	4.00e-153	534.00
IUUC-Bdi-014525	Brachypodium distachyon	60.26	0.00e+00	1027.00
IUUC-Bol-015117	Brassica oleracea	68.68	0.00e+00	1189.00
IUUC-Bra-016869	Brassica rapa	68.86	0.00e+00	1183.00
IUUC-Cel-018570	Caenorhabditis elegans	29.55	1.00e-96	347.00
IUUC-Cja-019425	Callithrix jacchus	38.77	1.00e-179	622.00
IUUC-Cfa-020787	Canis familiaris	38.22	3.00e-179	621.00
IUUC-Cpo-021729	Cavia porcellus	39.23	2.00e-137	482.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	51.35	1.00e-119	423.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.28	0.00e+00	627.00
IUUC-Cho-024495	Choloepus hoffmanni	35.43	3.00e-95	342.00
IUUC-Cin-025245	Ciona intestinalis	36.03	3.00e-104	371.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	36.65	2.00e-155	542.00
IUUC-Cne-026835	Cryptococcus neoformans	36.42	1.00e-147	516.00
IUUC-Cme-027162	Cyanidioschyzon merolae	28.17	6.00e-42	165.00
IUUC-Dre-027874	Danio rerio	38.73	9.00e-178	616.00
IUUC-Dno-028905	Dasypus novemcinctus	39.03	0.00e+00	637.00
IUUC-Dor-030383	Dipodomys ordii	35.94	4.00e-72	265.00
IUUC-Dse-031297	Dothistroma septosporum	35.44	4.00e-152	531.00
IUUC-Dme-031956	Drosophila melanogaster	33.37	6.00e-128	451.00
IUUC-Ete-032608	Echinops telfairi	36.53	1.00e-101	363.00
IUUC-Eca-034181	Equus caballus	38.24	0.00e+00	627.00
IUUC-Eeu-034495	Erinaceus europaeus	39.41	3.00e-175	608.00
IUUC-Fca-035994	Felis catus	39.95	1.00e-172	599.00
IUUC-Fal-036611	Ficedula albicollis	38.19	1.00e-172	599.00
IUUC-Fox-037807	Fusarium oxysporum	37.18	1.00e-162	566.00
IUUC-Fso-038090	Fusarium solani	36.75	9.00e-161	560.00
IUUC-Gmo-039018	Gadus morhua	35.32	8.00e-86	310.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.20	6.00e-161	560.00
IUUC-Gga-040707	Gallus gallus	45.07	5.00e-129	454.00
IUUC-Gac-042334	Gasterosteus aculeatus	35.50	4.00e-47	182.00
IUUC-Gma-043860	Glycine max	72.48	0.00e+00	1248.00
IUUC-Ggo-045334	Gorilla gorilla	38.45	1.00e-178	619.00
IUUC-Hsa-046996	Homo sapiens	38.53	2.00e-179	622.00
IUUC-Hvu-047381	Hordeum vulgare	58.01	3.00e-171	594.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.04	2.00e-179	622.00
IUUC-Kpa-049185	Komagataella pastoris	34.88	9.00e-151	526.00
IUUC-Lch-050098	Latimeria chalumnae	38.51	8.00e-155	540.00
IUUC-Lpe-050710	Leersia perrieri	59.96	0.00e+00	1009.00
IUUC-Loc-052745	Lepisosteus oculatus	38.19	5.00e-166	577.00
IUUC-Lma-053104	Leptosphaeria maculans	36.33	3.00e-160	559.00
IUUC-Laf-054395	Loxodonta africana	38.97	0.00e+00	632.00
IUUC-Mcc-055077	Macaca mulatta	38.49	1.00e-179	623.00
IUUC-Meu-056418	Macropus eugenii	45.01	9.00e-101	360.00
IUUC-Mor-057031	Magnaporthe oryzae	37.10	3.00e-145	508.00
IUUC-Mpo-057420	Magnaporthe poae	36.65	4.00e-155	541.00
IUUC-Mtr-057838	Medicago truncatula	69.50	0.00e+00	1243.00
IUUC-Mla-058854	Melampsora laricipopulina	34.69	1.00e-138	487.00
IUUC-Mga-060120	Meleagris gallopavo	41.39	4.00e-132	464.00
IUUC-Mvi-060407	Microbotryum violaceum	40.86	6.00e-130	457.00
IUUC-Mmr-060635	Microcebus murinus	39.09	0.00e+00	627.00
IUUC-Mdo-063023	Monodelphis domestica	39.58	0.00e+00	636.00
IUUC-Mmu-064103	Mus musculus	38.60	0.00e+00	634.00
IUUC-Mac-065569	Musa acuminata	65.64	0.00e+00	1175.00
IUUC-Mpu-066462	Mustela putorius furo	38.28	4.00e-179	620.00
IUUC-Mlu-067894	Myotis lucifugus	38.45	2.00e-180	625.00
IUUC-Nfi-068321	Neosartorya fischeri	37.37	5.00e-163	567.00
IUUC-Ncr-068661	Neurospora crassa	35.71	2.00e-157	549.00
IUUC-Nle-069409	Nomascus leucogenys	38.22	2.00e-179	622.00
IUUC-Opr-070445	Ochotona princeps	42.86	3.00e-125	442.00
IUUC-Ont-072339	Oreochromis niloticus	38.86	1.00e-168	586.00
IUUC-Oan-073688	Ornithorhynchus anatinus	39.55	2.00e-173	602.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.50	0.00e+00	632.00
IUUC-Oba-075635	Oryza barthii	60.19	0.00e+00	978.00
IUUC-Obr-076897	Oryza brachyantha	60.79	0.00e+00	1026.00
IUUC-Ogl-077555	Oryza glaberrima	60.09	0.00e+00	977.00
IUUC-Ogu-078724	Oryza glumaepatula	59.98	0.00e+00	978.00
IUUC-Oin-080030	Oryza indica	60.09	0.00e+00	979.00
IUUC-Olo-080687	Oryza longistaminata	56.54	0.00e+00	929.00
IUUC-Ome-081867	Oryza meridionalis	59.98	0.00e+00	976.00
IUUC-Oni-082559	Oryza nivara	59.98	0.00e+00	975.00
IUUC-Opu-083332	Oryza punctata	58.37	0.00e+00	903.00
IUUC-Oru-084455	Oryza rufipogon	60.19	0.00e+00	981.00
IUUC-Osa-085793	Oryza sativa	60.19	0.00e+00	981.00
IUUC-Ola-087395	Oryzias latipes	53.62	1.00e-101	363.00
IUUC-Olu-087768	Ostreococcus lucimarinus	44.32	0.00e+00	642.00
IUUC-Oga-088574	Otolemur garnettii	39.03	0.00e+00	629.00
IUUC-Oar-089453	Ovis aries	37.96	0.00e+00	637.00
IUUC-Ptr-090694	Pan troglodytes	38.43	2.00e-179	622.00
IUUC-Pan-092420	Papio anubis	38.30	2.00e-178	618.00
IUUC-Psi-093683	Pelodiscus sinensis	39.39	3.00e-178	618.00
IUUC-Pma-094197	Petromyzon marinus	36.24	6.00e-37	146.00
IUUC-Pno-094783	Phaeosphaeria nodorum	35.14	3.00e-153	535.00
IUUC-Ppa-095208	Physcomitrella patens	54.13	0.00e+00	884.00
IUUC-Pfo-096299	Poecilia formosa	38.86	3.00e-173	601.00
IUUC-Pab-098706	Pongo abelii	38.78	2.00e-179	622.00
IUUC-Pop-099275	Populus trichocarpa	72.96	0.00e+00	1258.00
IUUC-Pca-100796	Procavia capensis	32.36	5.00e-119	421.00
IUUC-Ppe-101861	Prunus persica	73.95	0.00e+00	1289.00
IUUC-Pva-103241	Pteropus vampyrus	37.79	4.00e-169	587.00
IUUC-Pgr-103432	Puccinia graminis	35.08	1.00e-140	493.00
IUUC-Ptt-103742	Puccinia triticina	37.72	7.00e-125	441.00
IUUC-Pte-104069	Pyrenophora teres	36.31	3.00e-153	535.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.95	6.00e-160	557.00
IUUC-Rno-105219	Rattus norvegicus	37.04	5.00e-177	614.00
IUUC-Sce-106271	Saccharomyces cerevisiae	35.07	4.00e-148	518.00
IUUC-Sha-107550	Sarcophilus harrisii	38.48	6.00e-178	617.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	36.54	1.00e-159	556.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.21	9.00e-168	583.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	35.37	3.00e-157	548.00
IUUC-Smo-109477	Selaginella moellendorffii	55.38	0.00e+00	919.00
IUUC-Sit-110000	Setaria italica	61.39	0.00e+00	1019.00
IUUC-Stu-112516	Solanum tuberosum	96.84	0.00e+00	1630.00
IUUC-Sar-113195	Sorex araneus	44.55	4.00e-122	431.00
IUUC-Sbi-114465	Sorghum bicolor	59.74	0.00e+00	1009.00
IUUC-Sre-115006	Sporisorium reilianum	41.38	9.00e-112	397.00
IUUC-Ssc-115929	Sus scrofa	38.65	0.00e+00	630.00
IUUC-Tgu-117282	Taeniopygia guttata	37.71	2.00e-170	592.00
IUUC-Tru-118406	Takifugu rubripes	37.37	6.00e-164	570.00
IUUC-Tsy-119170	Tarsius syrichta	37.93	9.00e-177	613.00
IUUC-Tni-119721	Tetraodon nigroviridis	43.75	4.00e-115	408.00
IUUC-Tca-121761	Theobroma cacao	75.57	0.00e+00	1336.00
IUUC-Tre-121908	Trichoderma reesei	37.21	7.00e-162	563.00
IUUC-Tvi-122547	Trichoderma virens	37.06	8.00e-163	566.00
IUUC-Tae-125433	Triticum aestivum	60.55	0.00e+00	1003.00
IUUC-Tur-126811	Triticum urartu	61.66	0.00e+00	987.00
IUUC-Tme-126987	Tuber melanosporum	38.94	2.00e-174	605.00
IUUC-Tbe-127315	Tupaia belangeri	43.89	4.00e-112	398.00
IUUC-Ttr-129165	Tursiops truncatus	34.38	9.00e-139	487.00
IUUC-Uma-129651	Ustilago maydis	34.66	1.00e-151	530.00
IUUC-Vda-129973	Verticillium dahliae	36.52	2.00e-151	529.00
IUUC-Vpa-130163	Vicugna pacos	39.38	3.00e-54	206.00
IUUC-Vvi-131402	Vitis vinifera	74.74	0.00e+00	1297.00
IUUC-Xtr-132296	Xenopus tropicalis	44.95	7.00e-126	444.00
IUUC-Xma-133028	Xiphophorus maculatus	38.58	4.00e-173	601.00
IUUC-Yli-134484	Yarrowia lipolytica	37.87	2.00e-150	525.00
IUUC-Zma-135938	Zea mays	58.01	0.00e+00	1009.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence