iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108251

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82; Transfer RNA methyltransferase 82

Genbank Nucleotide ID

CU329672

Gene Name

SPCC18.13; trm82

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC18.13	SPCC18.13.1	SPCC18.13.1:pep

Annotation

mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-12	45.6	224	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gH+d v+ +++ ++++l+sG++D+ + vWDl  +++l
   Q: 224  GHEDFVSRMSLyDNRTLISGGGDNHVFVWDLENFKCL 260
           79999999998665999**************999997 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MSEQRVFKHP CQFLTWNSKH NYIVCCSGPY LLGFSCSTGE KIFEHCYRDN INEKHREAAA 60
YGEAIRQVAF SKDYSRMATV SEDKCLRLWD STQPDKIELL YQKNIPKRCA DLCFAGSNEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCACGTACT AAAATTTTGG GCGCTTTAAC TATTTAACTT AAGTGAGATA CTTGGCTTCG 60
AACTGAGTGT ATACTTCTTT TATTTCTCTA TTTAGATAAA TTTGTAAGGA AACGGTATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0043527--C:tRNA methyltransferase complex
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

spo:SPCC18.13

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003975	Anas platyrhynchos	29.84	2.00e-11	61.60
IUUC-Aca-005170	Anolis carolinensis	23.67	6.00e-09	53.10
IUUC-Aly-005769	Arabidopsis lyrata	24.23	2.00e-12	65.10
IUUC-Acl-008151	Aspergillus clavatus	26.00	3.00e-28	117.00
IUUC-Afl-008518	Aspergillus flavus	30.11	8.00e-26	108.00
IUUC-Afu-009102	Aspergillus fumigatus	25.07	2.00e-26	112.00
IUUC-Ani-009442	Aspergillus nidulans	29.03	3.00e-28	117.00
IUUC-Aor-010133	Aspergillus oryzae	30.06	6.00e-30	123.00
IUUC-Ate-010465	Aspergillus terreus	27.80	6.00e-25	106.00
IUUC-Ame-010613	Astyanax mexicanus	25.08	6.00e-14	69.70
IUUC-Bgr-012067	Blumeria graminis	31.07	7.00e-31	126.00
IUUC-Bta-012788	Bos taurus	26.54	6.00e-15	73.20
IUUC-Bra-017059	Brassica rapa	24.01	6.00e-14	69.70
IUUC-Cpo-021963	Cavia porcellus	29.17	4.00e-15	73.60
IUUC-Csa-024148	Chlorocebus sabaeus	32.53	2.00e-11	61.20
IUUC-Cne-026834	Cryptococcus neoformans	29.01	2.00e-24	105.00
IUUC-Dre-028427	Danio rerio	27.62	2.00e-17	81.30
IUUC-Dor-030522	Dipodomys ordii	26.94	2.00e-12	65.10
IUUC-Dme-032136	Drosophila melanogaster	33.75	3.00e-12	64.30
IUUC-Fca-035833	Felis catus	27.50	4.00e-13	67.00
IUUC-Fal-037497	Ficedula albicollis	25.16	2.00e-12	64.70
IUUC-Gga-040547	Gallus gallus	26.21	3.00e-12	64.30
IUUC-Gac-041761	Gasterosteus aculeatus	27.76	1.00e-13	68.90
IUUC-Ggo-045340	Gorilla gorilla	30.49	3.00e-11	60.80
IUUC-Hsa-046403	Homo sapiens	31.22	3.00e-12	63.90
IUUC-Itr-048103	Ictidomys tridecemlineatus	27.33	2.00e-15	74.70
IUUC-Kpa-049283	Komagataella pastoris	34.58	2.00e-21	95.10
IUUC-Lch-050682	Latimeria chalumnae	27.09	4.00e-13	67.00
IUUC-Lpe-050712	Leersia perrieri	27.73	3.00e-16	77.80
IUUC-Loc-052599	Lepisosteus oculatus	29.04	3.00e-16	77.80
IUUC-Laf-054390	Loxodonta africana	26.44	4.00e-14	70.50
IUUC-Mcc-054747	Macaca mulatta	32.53	2.00e-11	61.60
IUUC-Mla-059135	Melampsora laricipopulina	32.84	2.00e-28	118.00
IUUC-Mga-059876	Meleagris gallopavo	26.69	1.00e-13	68.90
IUUC-Mvi-060359	Microbotryum violaceum	33.16	5.00e-22	97.40
IUUC-Mmr-061518	Microcebus murinus	28.31	2.00e-13	68.20
IUUC-Mac-065417	Musa acuminata	30.10	2.00e-16	77.80
IUUC-Nfi-068402	Neosartorya fischeri	26.90	4.00e-27	114.00
IUUC-Nle-069914	Nomascus leucogenys	36.56	1.00e-08	52.00
IUUC-Ont-071555	Oreochromis niloticus	29.54	2.00e-16	78.20
IUUC-Oan-072951	Ornithorhynchus anatinus	33.16	2.00e-14	71.20
IUUC-Ocu-074679	Oryctolagus cuniculus	30.00	1.00e-13	68.60
IUUC-Obr-076769	Oryza brachyantha	27.97	6.00e-17	80.10
IUUC-Ogl-077168	Oryza glaberrima	28.14	5.00e-18	83.20
IUUC-Oin-079207	Oryza indica	28.14	5.00e-18	83.20
IUUC-Opu-084031	Oryza punctata	27.52	2.00e-18	84.70
IUUC-Osa-085327	Oryza sativa	28.14	9.00e-18	82.40
IUUC-Ola-086716	Oryzias latipes	26.97	2.00e-16	77.80
IUUC-Olu-087708	Ostreococcus lucimarinus	22.62	6.00e-06	43.10
IUUC-Oar-090239	Ovis aries	26.14	3.00e-14	70.90
IUUC-Ptr-090851	Pan troglodytes	30.59	1.00e-11	62.00
IUUC-Pan-092558	Papio anubis	32.53	2.00e-11	61.60
IUUC-Psi-093792	Pelodiscus sinensis	30.65	6.00e-13	66.60
IUUC-Ppa-095757	Physcomitrella patens	29.05	6.00e-14	70.10
IUUC-Pfo-096465	Poecilia formosa	27.02	5.00e-18	83.60
IUUC-Pab-097722	Pongo abelii	33.14	8.00e-13	66.20
IUUC-Pop-098979	Populus trichocarpa	25.99	1.00e-13	68.90
IUUC-Pca-100753	Procavia capensis	27.36	6.00e-11	60.10
IUUC-Ppe-101515	Prunus persica	24.62	1.00e-12	65.50
IUUC-Sja-107780	Schizosaccharomyces japonicus	43.81	5.00e-100	355.00
IUUC-Smo-108938	Selaginella moellendorffii	25.88	2.00e-15	74.70
IUUC-Sit-110020	Setaria italica	24.94	8.00e-20	89.40
IUUC-Sly-111543	Solanum lycopersicum	25.86	4.00e-15	73.60
IUUC-Stu-111925	Solanum tuberosum	26.24	3.00e-15	74.30
IUUC-Sbi-114061	Sorghum bicolor	26.82	4.00e-20	90.10
IUUC-Tgu-117321	Taeniopygia guttata	24.25	4.00e-08	50.40
IUUC-Tru-118454	Takifugu rubripes	27.30	2.00e-15	75.10
IUUC-Tni-119894	Tetraodon nigroviridis	28.05	1.00e-17	81.60
IUUC-Tca-121746	Theobroma cacao	25.76	1.00e-16	79.30
IUUC-Tur-126254	Triticum urartu	23.58	1.00e-06	45.40
IUUC-Tbe-127683	Tupaia belangeri	36.00	2.00e-07	48.10
IUUC-Ttr-129056	Tursiops truncatus	27.43	4.00e-12	63.90
IUUC-Xma-133605	Xiphophorus maculatus	27.38	2.00e-16	78.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence