iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007247

UUCD1 version

UUC-ArT-01097

Ensembl Protein ID

AT4G37880.1

UniProt Accession

Q9T075; Q9T075_ARATH

Genbank Protein ID

AAV66093.1; AAX22273.1; AEE86848.1; CAB38936.1; CAB80453.1

Protein Name

At4g37880; LisH/CRA/RING-U-box domains-containing protein; Putative uncharacterized protein AT4g37880

Genbank Nucleotide ID

BT020222; BT021138; CP002687; AL035709; AL161592

Gene Name

At4g37880; T28I19.160; T28I19_160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G37880	AT4G37880.1	AT4G37880.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-07	30.5	330	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++ +e    +++p+ ++CgHv +++ ++k+  +kn s+ +f+CP+C
   Q: 330  CPVSKEQSsdDNPPMMMSCGHVLCKQTINKM--SKNGSKSSFKCPYC 374
           9999998867888******************..9************* PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MELKSIKDAF DRVATKQKLS YSKTNEIVHM LSQEIDKALS ILEETPSSDT MLLDHRSILA 60
DVKKVFMEIA PITQLEATEK ELHAALTKYP KVLEKQLNPD ISKAYRHNVE FDTHIVNQII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTATTCA CTATAACACG TGATAGTTCT CCCTAACTCG TAAGGATAAT AATCTGAAGG 60
AGTGATGAGA AAATATTAAC GAAAAACAAA AAAAAAAAGA CAGAAGACAA AAAAAAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR013144--CRA_dom
IPR024964--CTLH/CRA
IPR006595--CTLH_C
IPR006594--LisH
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50897--CTLH
PS50896--LISH
PS50089--ZF_RING_2

Pfam

PF10607--CLTH
PF13445--zf-RING_UBOX

SMART

SM00757--CRA
SM00668--CTLH

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034657--C:GID complex
GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G37880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000501	Aegilops tauschii	54.22	2.00e-117	415.00
IUUC-Aml-001548	Ailuropoda melanoleuca	37.35	6.00e-59	220.00
IUUC-Atr-003004	Amborella trichopoda	50.00	2.00e-113	401.00
IUUC-Apl-003644	Anas platyrhynchos	37.65	1.00e-59	222.00
IUUC-Aca-005137	Anolis carolinensis	33.33	2.00e-45	176.00
IUUC-Aly-005615	Arabidopsis lyrata	96.39	0.00e+00	751.00
IUUC-Ago-007826	Ashbya gossypii	26.12	2.00e-18	85.90
IUUC-Acl-008282	Aspergillus clavatus	34.10	2.00e-57	215.00
IUUC-Afl-008705	Aspergillus flavus	35.26	1.00e-57	216.00
IUUC-Afu-009079	Aspergillus fumigatus	35.57	4.00e-58	218.00
IUUC-Ani-009387	Aspergillus nidulans	35.40	7.00e-55	207.00
IUUC-Ang-009525	Aspergillus niger	30.41	1.00e-34	140.00
IUUC-Aor-009954	Aspergillus oryzae	35.26	1.00e-57	216.00
IUUC-Ate-010352	Aspergillus terreus	34.29	5.00e-57	215.00
IUUC-Ame-011850	Astyanax mexicanus	35.58	6.00e-57	213.00
IUUC-Bgr-012198	Blumeria graminis	35.12	2.00e-50	192.00
IUUC-Bta-013363	Bos taurus	37.35	6.00e-59	220.00
IUUC-Bci-013985	Botrytis cinerea	32.27	6.00e-54	204.00
IUUC-Bdi-014918	Brachypodium distachyon	52.19	2.00e-116	411.00
IUUC-Bol-015549	Brassica oleracea	78.09	0.00e+00	629.00
IUUC-Bra-017752	Brassica rapa	77.58	0.00e+00	649.00
IUUC-Cel-018146	Caenorhabditis elegans	25.23	1.00e-16	80.10
IUUC-Cja-019683	Callithrix jacchus	37.35	5.00e-59	220.00
IUUC-Cfa-020186	Canis familiaris	37.35	6.00e-59	220.00
IUUC-Cpo-021863	Cavia porcellus	37.35	6.00e-59	220.00
IUUC-Cre-022621	Chlamydomonas reinhardtii	47.55	3.00e-38	150.00
IUUC-Csa-023778	Chlorocebus sabaeus	37.35	6.00e-59	220.00
IUUC-Cho-024394	Choloepus hoffmanni	29.01	3.00e-36	145.00
IUUC-Cin-025509	Ciona intestinalis	32.45	6.00e-53	200.00
IUUC-Csv-025906	Ciona savignyi	32.51	2.00e-47	182.00
IUUC-Cgl-026770	Colletotrichum gloeosporioides	32.90	2.00e-47	182.00
IUUC-Cne-026984	Cryptococcus neoformans	28.34	2.00e-23	102.00
IUUC-Cme-027169	Cyanidioschyzon merolae	32.95	9.00e-61	226.00
IUUC-Dre-027541	Danio rerio	35.89	1.00e-57	216.00
IUUC-Dno-028947	Dasypus novemcinctus	35.11	2.00e-55	208.00
IUUC-Dor-030778	Dipodomys ordii	38.57	9.00e-52	196.00
IUUC-Dse-031216	Dothistroma septosporum	30.48	2.00e-46	179.00
IUUC-Dme-032053	Drosophila melanogaster	32.42	2.00e-50	192.00
IUUC-Ete-033138	Echinops telfairi	31.49	2.00e-45	176.00
IUUC-Eca-034297	Equus caballus	37.35	6.00e-59	220.00
IUUC-Fca-035452	Felis catus	34.54	1.00e-55	209.00
IUUC-Fal-037162	Ficedula albicollis	37.65	2.00e-59	222.00
IUUC-Fox-037791	Fusarium oxysporum	34.80	2.00e-50	192.00
IUUC-Fso-038261	Fusarium solani	35.35	5.00e-52	197.00
IUUC-Gmo-038538	Gadus morhua	35.58	3.00e-57	215.00
IUUC-Ggr-039758	Gaeumannomyces graminis	36.28	1.00e-56	213.00
IUUC-Gga-040152	Gallus gallus	37.65	2.00e-59	222.00
IUUC-Gac-042375	Gasterosteus aculeatus	36.50	2.00e-58	218.00
IUUC-Gma-043473	Glycine max	51.93	1.00e-108	385.00
IUUC-Ggo-044610	Gorilla gorilla	35.36	9.00e-57	213.00
IUUC-Hsa-046828	Homo sapiens	37.35	6.00e-59	220.00
IUUC-Hvu-047623	Hordeum vulgare	53.45	6.00e-116	409.00
IUUC-Itr-048574	Ictidomys tridecemlineatus	37.35	8.00e-59	220.00
IUUC-Kpa-049125	Komagataella pastoris	31.99	3.00e-44	172.00
IUUC-Lch-049725	Latimeria chalumnae	34.15	3.00e-52	198.00
IUUC-Lpe-051452	Leersia perrieri	52.19	3.00e-113	401.00
IUUC-Loc-052201	Lepisosteus oculatus	37.35	2.00e-59	222.00
IUUC-Lma-053061	Leptosphaeria maculans	32.45	1.00e-56	213.00
IUUC-Laf-054447	Loxodonta africana	34.32	2.00e-55	209.00
IUUC-Mcc-055378	Macaca mulatta	37.35	6.00e-59	220.00
IUUC-Meu-056571	Macropus eugenii	33.00	9.00e-53	200.00
IUUC-Mor-056969	Magnaporthe oryzae	38.33	1.00e-49	189.00
IUUC-Mpo-057427	Magnaporthe poae	36.48	2.00e-56	212.00
IUUC-Mtr-058293	Medicago truncatula	49.35	6.00e-113	400.00
IUUC-Mla-059074	Melampsora laricipopulina	33.33	9.00e-43	167.00
IUUC-Mga-059978	Meleagris gallopavo	37.65	2.00e-59	222.00
IUUC-Mvi-060298	Microbotryum violaceum	32.03	4.00e-22	99.00
IUUC-Mmr-061460	Microcebus murinus	36.42	2.00e-56	212.00
IUUC-Mdo-061921	Monodelphis domestica	33.50	2.00e-54	207.00
IUUC-Mmu-063553	Mus musculus	37.35	6.00e-59	220.00
IUUC-Mac-064452	Musa acuminata	51.32	5.00e-109	387.00
IUUC-Mpu-066545	Mustela putorius furo	37.35	6.00e-59	220.00
IUUC-Mlu-067713	Myotis lucifugus	33.76	4.00e-56	211.00
IUUC-Nfi-068340	Neosartorya fischeri	35.08	5.00e-57	214.00
IUUC-Ncr-068889	Neurospora crassa	39.33	5.00e-49	187.00
IUUC-Nle-069876	Nomascus leucogenys	34.11	4.00e-56	211.00
IUUC-Opr-070502	Ochotona princeps	36.14	4.00e-37	147.00
IUUC-Ont-072436	Oreochromis niloticus	36.20	6.00e-58	217.00
IUUC-Oan-072730	Ornithorhynchus anatinus	37.96	1.00e-59	222.00
IUUC-Ocu-073997	Oryctolagus cuniculus	37.35	6.00e-59	220.00
IUUC-Oba-075935	Oryza barthii	52.70	2.00e-113	401.00
IUUC-Ogl-077599	Oryza glaberrima	52.70	2.00e-113	401.00
IUUC-Ogu-079031	Oryza glumaepatula	52.70	3.00e-118	417.00
IUUC-Oin-079236	Oryza indica	52.70	1.00e-113	402.00
IUUC-Olo-080825	Oryza longistaminata	52.44	3.00e-113	401.00
IUUC-Ome-081998	Oryza meridionalis	52.44	3.00e-113	400.00
IUUC-Oni-082555	Oryza nivara	52.70	1.00e-113	402.00
IUUC-Opu-084156	Oryza punctata	52.44	2.00e-112	398.00
IUUC-Oru-085269	Oryza rufipogon	52.70	1.00e-113	402.00
IUUC-Osa-085795	Oryza sativa	52.70	1.00e-113	402.00
IUUC-Ola-087481	Oryzias latipes	35.78	2.00e-56	212.00
IUUC-Oga-088917	Otolemur garnettii	37.35	6.00e-59	220.00
IUUC-Oar-090104	Ovis aries	37.35	6.00e-59	220.00
IUUC-Ptr-090545	Pan troglodytes	35.36	9.00e-57	213.00
IUUC-Pan-091970	Papio anubis	37.35	6.00e-59	220.00
IUUC-Psi-093133	Pelodiscus sinensis	37.65	2.00e-59	222.00
IUUC-Pma-094313	Petromyzon marinus	37.17	2.00e-55	208.00
IUUC-Pno-094966	Phaeosphaeria nodorum	35.00	2.00e-56	213.00
IUUC-Ppa-095525	Physcomitrella patens	44.99	3.00e-104	370.00
IUUC-Pfo-096415	Poecilia formosa	36.50	2.00e-56	212.00
IUUC-Pab-098226	Pongo abelii	37.35	6.00e-59	220.00
IUUC-Pop-099161	Populus trichocarpa	60.10	7.00e-139	486.00
IUUC-Pca-100101	Procavia capensis	38.78	4.00e-18	85.10
IUUC-Ppe-101172	Prunus persica	60.26	6.00e-130	456.00
IUUC-Pva-102124	Pteropus vampyrus	37.28	9.00e-47	180.00
IUUC-Pgr-103586	Puccinia graminis	36.76	9.00e-33	134.00
IUUC-Pte-104149	Pyrenophora teres	32.54	2.00e-53	202.00
IUUC-Pyt-104577	Pyrenophora triticirepentis	39.04	2.00e-48	185.00
IUUC-Rno-105160	Rattus norvegicus	37.35	6.00e-59	220.00
IUUC-Sce-106260	Saccharomyces cerevisiae	28.24	1.00e-26	113.00
IUUC-Sha-107085	Sarcophilus harrisii	34.37	5.00e-57	214.00
IUUC-Sja-107986	Schizosaccharomyces japonicus	34.58	4.00e-36	144.00
IUUC-Spo-108054	Schizosaccharomyces pombe	35.56	1.00e-48	186.00
IUUC-Ssl-108439	Sclerotinia sclerotiorum	39.18	3.00e-54	204.00
IUUC-Smo-109084	Selaginella moellendorffii	48.59	1.00e-106	379.00
IUUC-Sit-109808	Setaria italica	54.45	1.00e-119	422.00
IUUC-Sly-111578	Solanum lycopersicum	56.92	5.00e-133	466.00
IUUC-Stu-112255	Solanum tuberosum	57.44	6.00e-134	469.00
IUUC-Sar-113433	Sorex araneus	37.01	1.00e-22	100.00
IUUC-Sbi-114206	Sorghum bicolor	54.45	7.00e-120	422.00
IUUC-Sre-115108	Sporisorium reilianum	31.90	6.00e-28	117.00
IUUC-Ssc-115466	Sus scrofa	37.35	5.00e-59	220.00
IUUC-Tgu-116744	Taeniopygia guttata	37.65	2.00e-59	222.00
IUUC-Tru-118729	Takifugu rubripes	36.20	3.00e-58	218.00
IUUC-Tsy-119164	Tarsius syrichta	37.35	5.00e-59	220.00
IUUC-Tni-119975	Tetraodon nigroviridis	36.20	4.00e-58	217.00
IUUC-Tca-121086	Theobroma cacao	61.03	8.00e-133	466.00
IUUC-Tre-122252	Trichoderma reesei	39.33	1.00e-43	169.00
IUUC-Tvi-122591	Trichoderma virens	38.08	2.00e-42	165.00
IUUC-Tae-122825	Triticum aestivum	54.22	7.00e-118	416.00
IUUC-Tur-126299	Triticum urartu	52.69	3.00e-115	407.00
IUUC-Tme-127008	Tuber melanosporum	35.32	7.00e-65	240.00
IUUC-Tbe-128119	Tupaia belangeri	37.35	4.00e-59	221.00
IUUC-Ttr-128810	Tursiops truncatus	38.67	4.00e-53	201.00
IUUC-Uma-129656	Ustilago maydis	38.89	2.00e-26	112.00
IUUC-Vda-129967	Verticillium dahliae	39.27	9.00e-56	210.00
IUUC-Vvi-131145	Vitis vinifera	55.27	3.00e-123	434.00
IUUC-Xtr-132522	Xenopus tropicalis	37.54	1.00e-58	219.00
IUUC-Xma-134046	Xiphophorus maculatus	36.50	5.00e-58	217.00
IUUC-Yli-134400	Yarrowia lipolytica	33.33	2.00e-56	212.00
IUUC-Zma-134785	Zea mays	54.71	2.00e-120	425.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence