iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tre-122095

Ensembl Protein ID

EGR53112

UniProt Accession

G0R7K7; G0R7K7_HYPJQ

Genbank Protein ID

EGR53112.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

GL985056

Gene Name

TRIREDRAFT_53669

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIREDRAFT_53669	EGR53112	EGR53112

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	33.94	8.00e-31	132.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Trichoderma reesei

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAATERFLH LARPLAHTNI GLQTNIAPLT VQIQPQAVLS ILDHAVRRDV RENSQSTRVI 60
GALVGTRSED GTEVEVRQCF AIPHTEEEDQ VEVDVEYQKN MLALVLKASP RESLLGWYTT 120

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Nucleotide Sequence
(Fasta)

ATGGCTGCCG CTACGGAACG GTTCCTGCAC CTCGCTCGCC CGCTGGCTCA CACGAATATC 60
GGGCTCCAGA CGAACATTGC CCCGCTCACT GTCCAGATCC AGCCTCAGGT ATAGACCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

tre:TRIREDRAFT_53669

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	30.67	3.00e-28	117.00
IUUC-Aml-001527	Ailuropoda melanoleuca	33.94	2.00e-38	150.00
IUUC-Atr-002686	Amborella trichopoda	30.60	2.00e-25	107.00
IUUC-Apl-003977	Anas platyrhynchos	32.89	1.00e-34	137.00
IUUC-Aca-004335	Anolis carolinensis	31.77	9.00e-37	145.00
IUUC-Aly-005945	Arabidopsis lyrata	31.65	4.00e-30	123.00
IUUC-Ath-007045	Arabidopsis thaliana	30.94	5.00e-30	122.00
IUUC-Acl-008365	Aspergillus clavatus	62.99	3.00e-114	402.00
IUUC-Afl-008742	Aspergillus flavus	62.99	5.00e-109	385.00
IUUC-Afu-009030	Aspergillus fumigatus	63.96	1.00e-116	411.00
IUUC-Ani-009212	Aspergillus nidulans	64.29	3.00e-116	409.00
IUUC-Ang-009712	Aspergillus niger	62.99	7.00e-114	401.00
IUUC-Aor-009885	Aspergillus oryzae	63.31	2.00e-116	410.00
IUUC-Ate-010315	Aspergillus terreus	64.61	2.00e-110	390.00
IUUC-Ame-010801	Astyanax mexicanus	28.37	4.00e-23	99.80
IUUC-Bgr-011982	Blumeria graminis	69.35	3.00e-128	449.00
IUUC-Bta-012804	Bos taurus	33.94	2.00e-38	151.00
IUUC-Bci-013891	Botrytis cinerea	74.52	7.00e-129	451.00
IUUC-Bdi-014328	Brachypodium distachyon	29.58	4.00e-27	113.00
IUUC-Bol-015446	Brassica oleracea	32.27	3.00e-32	130.00
IUUC-Bra-016862	Brassica rapa	32.27	5.00e-32	129.00
IUUC-Cel-018171	Caenorhabditis elegans	26.03	6.00e-25	106.00
IUUC-Cja-019335	Callithrix jacchus	33.94	2.00e-38	151.00
IUUC-Cfa-020138	Canis familiaris	33.94	1.00e-38	151.00
IUUC-Cpo-022109	Cavia porcellus	31.69	4.00e-32	130.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	31.25	1.00e-36	144.00
IUUC-Csa-023994	Chlorocebus sabaeus	33.94	2.00e-38	151.00
IUUC-Cho-024351	Choloepus hoffmanni	25.63	1.00e-16	79.00
IUUC-Cin-025801	Ciona intestinalis	29.68	2.00e-38	150.00
IUUC-Csv-025805	Ciona savignyi	29.33	8.00e-36	142.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	81.82	5.00e-151	525.00
IUUC-Cne-026868	Cryptococcus neoformans	31.90	4.00e-40	156.00
IUUC-Cme-027328	Cyanidioschyzon merolae	23.34	4.00e-12	63.50
IUUC-Dre-028085	Danio rerio	33.33	6.00e-40	155.00
IUUC-Dno-030099	Dasypus novemcinctus	33.57	4.00e-38	150.00
IUUC-Dor-030324	Dipodomys ordii	29.24	1.00e-26	112.00
IUUC-Dse-031314	Dothistroma septosporum	63.49	3.00e-113	399.00
IUUC-Dme-031926	Drosophila melanogaster	28.37	2.00e-32	130.00
IUUC-Ete-032569	Echinops telfairi	32.37	3.00e-34	137.00
IUUC-Eca-033502	Equus caballus	33.46	1.00e-36	145.00
IUUC-Eeu-034883	Erinaceus europaeus	24.74	2.00e-10	56.60
IUUC-Fca-035873	Felis catus	33.94	2.00e-38	151.00
IUUC-Fal-036921	Ficedula albicollis	33.70	1.00e-40	158.00
IUUC-Fox-037765	Fusarium oxysporum	85.90	1.00e-154	536.00
IUUC-Fso-038240	Fusarium solani	87.18	1.00e-156	544.00
IUUC-Gmo-038864	Gadus morhua	33.94	1.00e-40	158.00
IUUC-Ggr-039862	Gaeumannomyces graminis	72.35	2.00e-128	450.00
IUUC-Gga-040952	Gallus gallus	34.05	6.00e-41	159.00
IUUC-Gac-041677	Gasterosteus aculeatus	33.57	9.00e-41	158.00
IUUC-Gma-043061	Glycine max	31.56	8.00e-26	108.00
IUUC-Ggo-045591	Gorilla gorilla	33.94	2.00e-38	151.00
IUUC-Hsa-046860	Homo sapiens	33.94	2.00e-38	151.00
IUUC-Hvu-047410	Hordeum vulgare	27.40	1.00e-14	70.50
IUUC-Itr-048211	Ictidomys tridecemlineatus	33.94	2.00e-38	151.00
IUUC-Lch-049410	Latimeria chalumnae	38.73	5.00e-22	95.90
IUUC-Lpe-051102	Leersia perrieri	31.15	4.00e-28	116.00
IUUC-Loc-052016	Lepisosteus oculatus	29.64	3.00e-27	113.00
IUUC-Lma-053157	Leptosphaeria maculans	62.01	5.00e-115	405.00
IUUC-Laf-054568	Loxodonta africana	33.57	4.00e-38	150.00
IUUC-Mcc-054613	Macaca mulatta	33.94	1.00e-38	151.00
IUUC-Meu-056832	Macropus eugenii	27.34	3.00e-12	63.20
IUUC-Mor-057104	Magnaporthe oryzae	73.31	8.00e-138	481.00
IUUC-Mtr-058445	Medicago truncatula	30.94	8.00e-35	138.00
IUUC-Mla-059038	Melampsora laricipopulina	33.66	7.00e-40	155.00
IUUC-Mga-059548	Meleagris gallopavo	33.33	5.00e-36	142.00
IUUC-Mvi-060520	Microbotryum violaceum	30.26	2.00e-28	117.00
IUUC-Mdo-062376	Monodelphis domestica	33.33	3.00e-39	154.00
IUUC-Mmu-063254	Mus musculus	33.94	2.00e-38	151.00
IUUC-Mac-065635	Musa acuminata	30.58	7.00e-30	122.00
IUUC-Mpu-066314	Mustela putorius furo	33.94	2.00e-38	151.00
IUUC-Mlu-067512	Myotis lucifugus	33.94	2.00e-38	150.00
IUUC-Nfi-068262	Neosartorya fischeri	63.64	4.00e-116	409.00
IUUC-Ncr-068872	Neurospora crassa	73.23	4.00e-123	432.00
IUUC-Nle-070118	Nomascus leucogenys	33.94	2.00e-38	151.00
IUUC-Opr-071228	Ochotona princeps	32.79	4.00e-34	136.00
IUUC-Ont-072600	Oreochromis niloticus	33.21	4.00e-40	156.00
IUUC-Oan-073584	Ornithorhynchus anatinus	33.33	7.00e-35	138.00
IUUC-Ocu-074542	Oryctolagus cuniculus	33.94	1.00e-38	152.00
IUUC-Oba-075923	Oryza barthii	30.71	7.00e-30	122.00
IUUC-Obr-076313	Oryza brachyantha	31.54	3.00e-30	124.00
IUUC-Ogl-076932	Oryza glaberrima	30.71	7.00e-30	122.00
IUUC-Ogu-078152	Oryza glumaepatula	30.71	7.00e-30	122.00
IUUC-Oin-079528	Oryza indica	30.71	7.00e-30	122.00
IUUC-Olo-080401	Oryza longistaminata	30.71	7.00e-30	122.00
IUUC-Ome-081553	Oryza meridionalis	30.71	5.00e-30	122.00
IUUC-Oni-082090	Oryza nivara	30.60	4.00e-30	123.00
IUUC-Opu-083583	Oryza punctata	31.54	3.00e-29	120.00
IUUC-Oru-084492	Oryza rufipogon	30.71	7.00e-30	122.00
IUUC-Osa-085383	Oryza sativa	30.71	7.00e-30	122.00
IUUC-Ola-086835	Oryzias latipes	32.85	7.00e-40	155.00
IUUC-Olu-087716	Ostreococcus lucimarinus	25.91	2.00e-19	87.80
IUUC-Oga-088886	Otolemur garnettii	33.94	9.00e-39	152.00
IUUC-Oar-090079	Ovis aries	33.94	1.00e-38	151.00
IUUC-Ptr-091457	Pan troglodytes	33.94	2.00e-38	151.00
IUUC-Pan-092317	Papio anubis	27.89	1.00e-16	77.80
IUUC-Psi-093129	Pelodiscus sinensis	32.43	5.00e-36	143.00
IUUC-Pma-094488	Petromyzon marinus	33.33	2.00e-41	160.00
IUUC-Pno-095049	Phaeosphaeria nodorum	63.61	2.00e-117	414.00
IUUC-Ppa-095341	Physcomitrella patens	29.00	7.00e-40	155.00
IUUC-Pfo-096286	Poecilia formosa	32.98	4.00e-41	159.00
IUUC-Pab-097765	Pongo abelii	33.94	2.00e-38	151.00
IUUC-Pop-099131	Populus trichocarpa	29.54	1.00e-30	124.00
IUUC-Pca-100524	Procavia capensis	26.47	8.00e-19	85.10
IUUC-Ppe-101934	Prunus persica	30.94	5.00e-37	145.00
IUUC-Pva-102577	Pteropus vampyrus	33.94	5.00e-38	149.00
IUUC-Pgr-103521	Puccinia graminis	30.21	5.00e-36	143.00
IUUC-Ptt-103773	Puccinia triticina	21.99	1.00e-07	48.50
IUUC-Pte-104304	Pyrenophora teres	62.99	9.00e-117	411.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	62.99	1.00e-116	410.00
IUUC-Rno-105717	Rattus norvegicus	33.94	2.00e-38	151.00
IUUC-Sha-107190	Sarcophilus harrisii	33.70	2.00e-38	150.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	42.63	1.00e-74	270.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.05	4.00e-76	276.00
IUUC-Smo-109374	Selaginella moellendorffii	32.01	3.00e-41	159.00
IUUC-Sit-110119	Setaria italica	30.58	6.00e-30	122.00
IUUC-Sly-111570	Solanum lycopersicum	26.15	4.00e-24	103.00
IUUC-Stu-112308	Solanum tuberosum	28.69	3.00e-29	120.00
IUUC-Sar-113515	Sorex araneus	52.17	4.60e-02	29.30
IUUC-Sbi-114605	Sorghum bicolor	30.22	2.00e-29	121.00
IUUC-Sre-114906	Sporisorium reilianum	40.92	3.00e-56	210.00
IUUC-Tgu-117087	Taeniopygia guttata	32.50	8.00e-35	138.00
IUUC-Tru-117700	Takifugu rubripes	33.94	6.00e-40	155.00
IUUC-Tni-120470	Tetraodon nigroviridis	33.94	2.00e-40	157.00
IUUC-Tca-121109	Theobroma cacao	29.89	1.00e-25	108.00
IUUC-Tvi-122580	Trichoderma virens	99.36	3.00e-177	612.00
IUUC-Tae-125129	Triticum aestivum	31.29	4.00e-31	126.00
IUUC-Tur-126658	Triticum urartu	29.71	8.00e-26	108.00
IUUC-Tme-127043	Tuber melanosporum	54.05	2.00e-98	350.00
IUUC-Tbe-127927	Tupaia belangeri	33.94	2.00e-38	151.00
IUUC-Ttr-129231	Tursiops truncatus	33.94	1.00e-38	151.00
IUUC-Uma-129578	Ustilago maydis	40.59	8.00e-56	208.00
IUUC-Vda-129730	Verticillium dahliae	80.00	4.00e-150	522.00
IUUC-Vpa-130677	Vicugna pacos	54.55	1.00e-01	29.30
IUUC-Vvi-130968	Vitis vinifera	30.25	1.00e-30	124.00
IUUC-Xtr-132203	Xenopus tropicalis	31.88	3.00e-39	153.00
IUUC-Xma-133972	Xiphophorus maculatus	33.09	1.00e-40	157.00
IUUC-Yli-134553	Yarrowia lipolytica	43.06	5.00e-60	222.00
IUUC-Zma-134941	Zea mays	30.27	5.00e-24	102.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence