iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095819

Ensembl Protein ID

PP1S197_90V6.1

UniProt Accession

A9TB49; A9TB49_PHYPA

Genbank Protein ID

EDQ59390.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

DS545086

Gene Name

HIRA1501; PHYPADRAFT_193337

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S197_90V6	PP1S197_90V6.1	PP1S197_90V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-21	74.6	121	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v +l + +d t l+s+s D+ti+vW  +tg
   Q: 121  GHSADVVDLGWsPDdTQLASCSLDNTIRVWQASTG 155
           8***********777***************97776 PP

Organism

Physcomitrella patens

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MIVEKPTWLR HAGLQIFSVD TQPNGLRFAT AGGDHKVRIW NMRPLAEKET DSDTKLLATL 60
RDHFGSVNCV RWAKCGQKIA SGSDDQVVLI HEKRPGSGTT EFGSGEPPDV ENWKVLLTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGTGG AAAAGCCCAC GTGGTTGCGC CATGCCGGAC TCCAGATTTT CTCCGTGGAC 60
ACACAGCCCA ATGGCCTCCG TTTTGCCACA GCCGGAGGGG ATCACAAGGT ATTTATTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0031491--F:nucleosome binding
GO:0003714--F:transcription corepressor activity
GO:0016569--P:covalent chromatin modification
GO:0006336--P:DNA replication-independent nucleosome assembly
GO:0031935--P:regulation of chromatin silencing
GO:0006351--P:transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_193337

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001723	Ailuropoda melanoleuca	38.97	3.00e-80	293.00
IUUC-Apl-003197	Anas platyrhynchos	35.74	3.00e-84	305.00
IUUC-Aca-004733	Anolis carolinensis	36.02	5.00e-85	308.00
IUUC-Aly-005446	Arabidopsis lyrata	48.25	0.00e+00	905.00
IUUC-Ath-007627	Arabidopsis thaliana	46.65	0.00e+00	904.00
IUUC-Ago-007766	Ashbya gossypii	32.57	2.00e-60	226.00
IUUC-Acl-008104	Aspergillus clavatus	26.42	3.00e-91	329.00
IUUC-Afu-008781	Aspergillus fumigatus	34.32	8.00e-65	241.00
IUUC-Ang-009655	Aspergillus niger	34.02	6.00e-72	265.00
IUUC-Bgr-012237	Blumeria graminis	35.44	3.00e-66	246.00
IUUC-Bta-013320	Bos taurus	38.97	4.00e-80	292.00
IUUC-Bci-013795	Botrytis cinerea	34.33	1.00e-69	258.00
IUUC-Bra-016651	Brassica rapa	47.20	0.00e+00	886.00
IUUC-Cel-018692	Caenorhabditis elegans	30.60	1.00e-46	181.00
IUUC-Cja-018987	Callithrix jacchus	34.09	6.00e-73	268.00
IUUC-Cfa-020132	Canis familiaris	38.58	2.00e-80	293.00
IUUC-Cpo-021484	Cavia porcellus	39.30	1.00e-84	307.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	37.34	3.00e-77	283.00
IUUC-Csa-023081	Chlorocebus sabaeus	39.30	1.00e-84	307.00
IUUC-Cme-027349	Cyanidioschyzon merolae	25.00	6.00e-63	235.00
IUUC-Dre-027655	Danio rerio	34.84	4.00e-81	295.00
IUUC-Dno-029557	Dasypus novemcinctus	38.74	5.00e-68	252.00
IUUC-Dor-030687	Dipodomys ordii	32.84	3.00e-64	239.00
IUUC-Dme-031746	Drosophila melanogaster	39.81	4.00e-86	312.00
IUUC-Eca-033430	Equus caballus	35.26	7.00e-82	298.00
IUUC-Fca-036121	Felis catus	38.64	2.00e-81	296.00
IUUC-Fal-036817	Ficedula albicollis	35.55	1.00e-81	297.00
IUUC-Fox-037906	Fusarium oxysporum	33.91	2.00e-70	259.00
IUUC-Gmo-039151	Gadus morhua	37.50	2.00e-79	290.00
IUUC-Gga-040936	Gallus gallus	35.90	9.00e-86	311.00
IUUC-Gac-041405	Gasterosteus aculeatus	38.97	3.00e-76	279.00
IUUC-Ggo-045430	Gorilla gorilla	39.30	9.00e-85	307.00
IUUC-Hsa-046442	Homo sapiens	39.30	9.00e-85	307.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	40.06	8.00e-63	233.00
IUUC-Kpa-049145	Komagataella pastoris	28.43	6.00e-52	198.00
IUUC-Lch-050474	Latimeria chalumnae	34.86	3.00e-79	289.00
IUUC-Loc-052119	Lepisosteus oculatus	34.65	6.00e-79	288.00
IUUC-Laf-053718	Loxodonta africana	39.05	1.00e-84	307.00
IUUC-Mcc-055621	Macaca mulatta	37.71	5.00e-72	265.00
IUUC-Meu-055914	Macropus eugenii	35.93	9.00e-56	211.00
IUUC-Mga-060181	Meleagris gallopavo	35.59	3.00e-81	296.00
IUUC-Mdo-062301	Monodelphis domestica	36.35	2.00e-86	313.00
IUUC-Mmu-063888	Mus musculus	36.09	1.00e-85	310.00
IUUC-Mpu-066732	Mustela putorius furo	38.97	2.00e-80	293.00
IUUC-Mlu-067542	Myotis lucifugus	34.60	2.00e-81	296.00
IUUC-Nfi-068396	Neosartorya fischeri	34.32	4.00e-65	242.00
IUUC-Ncr-068842	Neurospora crassa	35.89	3.00e-72	266.00
IUUC-Nle-070156	Nomascus leucogenys	39.30	1.00e-84	307.00
IUUC-Opr-070808	Ochotona princeps	38.29	7.00e-54	205.00
IUUC-Ocu-074962	Oryctolagus cuniculus	34.87	8.00e-81	294.00
IUUC-Ola-087302	Oryzias latipes	36.21	4.00e-72	265.00
IUUC-Olu-087611	Ostreococcus lucimarinus	48.69	1.00e-119	423.00
IUUC-Oga-087935	Otolemur garnettii	38.97	2.00e-80	293.00
IUUC-Oar-089229	Ovis aries	31.52	2.00e-62	233.00
IUUC-Ptr-090715	Pan troglodytes	39.30	9.00e-85	307.00
IUUC-Pan-092318	Papio anubis	38.68	2.00e-80	293.00
IUUC-Psi-094053	Pelodiscus sinensis	35.29	2.00e-80	293.00
IUUC-Pfo-096857	Poecilia formosa	38.46	1.00e-75	277.00
IUUC-Pab-098047	Pongo abelii	39.30	9.00e-85	307.00
IUUC-Pca-100558	Procavia capensis	43.84	5.00e-48	186.00
IUUC-Pva-102683	Pteropus vampyrus	35.03	2.00e-82	300.00
IUUC-Pte-104209	Pyrenophora teres	34.40	9.00e-70	258.00
IUUC-Rno-105566	Rattus norvegicus	35.71	3.00e-85	309.00
IUUC-Sce-106291	Saccharomyces cerevisiae	32.72	9.00e-61	227.00
IUUC-Sha-107514	Sarcophilus harrisii	33.78	4.00e-73	269.00
IUUC-Spo-108162	Schizosaccharomyces pombe	36.68	9.00e-74	271.00
IUUC-Smo-109186	Selaginella moellendorffii	52.67	0.00e+00	956.00
IUUC-Sar-113222	Sorex araneus	34.17	1.00e-74	274.00
IUUC-Ssc-116364	Sus scrofa	34.68	3.00e-81	296.00
IUUC-Tgu-116645	Taeniopygia guttata	35.84	5.00e-82	298.00
IUUC-Tru-117590	Takifugu rubripes	34.77	2.00e-80	293.00
IUUC-Tsy-119212	Tarsius syrichta	38.89	3.00e-68	253.00
IUUC-Tni-119915	Tetraodon nigroviridis	34.72	1.00e-80	293.00
IUUC-Tme-127202	Tuber melanosporum	32.18	9.00e-52	198.00
IUUC-Tbe-127350	Tupaia belangeri	33.52	1.00e-50	194.00
IUUC-Ttr-129077	Tursiops truncatus	43.24	6.00e-63	235.00
IUUC-Uma-129465	Ustilago maydis	36.84	1.00e-72	267.00
IUUC-Vda-129844	Verticillium dahliae	34.03	1.00e-69	257.00
IUUC-Vvi-131397	Vitis vinifera	50.44	0.00e+00	944.00
IUUC-Xtr-132057	Xenopus tropicalis	34.67	5.00e-85	308.00
IUUC-Xma-134139	Xiphophorus maculatus	37.15	2.00e-64	239.00
IUUC-Yli-134424	Yarrowia lipolytica	33.65	2.00e-63	237.00
IUUC-Zma-135839	Zea mays	50.30	0.00e+00	951.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence