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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Cel-018330
UUCD1 version UUC-CaE-00014
Ensembl Protein ID F59B2.6
UniProt Accession P34482; ZIF1_CAEEL
Genbank Protein ID AAS49906.1; CAA77583.2
Protein Name Zinc finger-interacting factor 1
Genbank Nucleotide ID AY547284; Z11505
Gene Name zif-1; tag-6; F59B2.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00006977 F59B2.6 F59B2.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDPINAMentha
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box SOCS 16469970
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description



     Probable substrate recognition component of a CBC (Cul2-ElonginB-ElonginC) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Ensures germline precursor cell asymmetry by targeting germline proteins for destruction if expressed in non-germline cells. This process also requires elc-1, cul-2, rbx-1 and ubc-2.
Probable substrate recognition component of a CBC (Cul2-ElonginB-ElonginC) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Ensures germline precursor cell asymmetry by targeting germline proteins for destruction if expressed in non-germline cells. This process also requires elc-1, cul-2, rbx-1 and ubc-2.
Protein Sequence
(Fasta)
MSECSASTSQ LSTFCVNEIP WKLVPQTCDE FSEYEFIDEK YRRLSDVESF VWKWSPCGRY 60
GIDLPGGRDV INQQLRDRMA VFDLHTNKWT LYTMDRGAFE IPRVCFLYWA RNDIIGTITL 120
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Protein Fasta Sequence



>IUUC-Cel-018330|E3,SOCS|Caenorhabditis elegans
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Nucleotide Sequence
(Fasta)
ATGAGTGAGT GTTCCGCGAG TACCAGTCAG TTATCTACTT TCTGTGTAAA TGAGATACCA 60
TGGAAGTTGG TTCCACAGGT AAAAATCTTG AAAACCACTC AGTTTCGACA AAACAAAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cel-018330|E3,SOCS|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Gene Ontology

GO:0009792--P:embryo development ending in birth or egg hatching
GO:0016567--P:protein ubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG cel:CELE_F59B2.6
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000738 Aegilops tauschii 25.30 1.00e-01 30.40
IUUC-Atr-002569 Amborella trichopoda 48.00 3.00e-02 30.00
IUUC-Aly-005595 Arabidopsis lyrata 45.71 3.70e-02 32.00
IUUC-Acl-008088 Aspergillus clavatus 27.55 1.00e-02 32.70
IUUC-Ate-010524 Aspergillus terreus 20.12 1.30e-02 33.10
IUUC-Bra-017802 Brassica rapa 26.83 5.40e-02 32.00
IUUC-Csa-023023 Chlorocebus sabaeus 35.14 2.20e-01 29.30
IUUC-Cin-025608 Ciona intestinalis 26.92 2.00e-02 32.00
IUUC-Csv-026250 Ciona savignyi 28.00 1.00e-01 30.40
IUUC-Hsa-045796 Homo sapiens 35.14 4.60e-01 28.10
IUUC-Mga-136544 Meleagris gallopavo 37.50 2.50e-01 29.60
IUUC-Oba-075017 Oryza barthii 32.84 8.50e-02 30.40
IUUC-Ogl-077488 Oryza glaberrima 28.85 6.30e-01 27.30
IUUC-Osa-085545 Oryza sativa 45.16 5.60e-02 30.00
IUUC-Ola-086560 Oryzias latipes 35.29 6.70e-02 29.60
IUUC-Ptr-091335 Pan troglodytes 35.14 4.80e-01 28.10
IUUC-Pan-092676 Papio anubis 35.14 2.30e-01 29.30
IUUC-Pno-095076 Phaeosphaeria nodorum 24.72 1.30e-02 31.60
IUUC-Pab-098339 Pongo abelii 32.43 1.40e+00 26.60
IUUC-Ptt-103906 Puccinia triticina 27.45 1.20e+00 25.40
IUUC-Pyt-104442 Pyrenophora triticirepentis 24.72 4.10e-02 30.00
IUUC-Tni-119992 Tetraodon nigroviridis 36.17 3.10e-02 30.40
Created Date 25-Jun-2017

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