iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135138

UUCD1 version

UUC-ZeM-00466

Ensembl Protein ID

Zm00001d039374_T001

UniProt Accession

A0A1D6MFZ9; A0A1D6MFZ9_MAIZE

Genbank Protein ID

ONM28490.1

Protein Name

RING-H2 finger protein ATL3

Genbank Nucleotide ID

CM007649

Gene Name

ZEAMMB73_Zm00001d039374

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039374	Zm00001d039374_T001	Zm00001d039374_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-09	38.0	143	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++ dg  ++ lp C Hvfh dC+ +w       + + +CP+Cr
   Q: 143  CAVCLSELADGekVRALPgCSHVFHVDCIDAW------LRSRTTCPVCR 185
           ********55555999****************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSIPSMSSSS PSVGSPLPPA RDGGPGPFVW RQKEQPQPQP QPQHPDYSFT GRVLLTAVVI 60
LAILTVVFVL IRLLLYQFVA RGRGRLAVGV RRSFGSFARR SARHGLAASA LAALPVATYR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCATCC CATCCATGTC GAGCTCGAGC CCCTCCGTGG GGAGCCCTTT GCCGCCGGCG 60
CGCGACGGCG GGCCGGGCCC GTTCGTGTGG CGGCAGAAGG AGCAGCCGCA GCCGCAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000308--14-3-3
IPR023409--14-3-3_CS
IPR023410--14-3-3_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00797--1433_2
PS50089--ZF_RING_2

Pfam

PF00244--14-3-3
PF13639--zf-RING_2

PRINTS

PR00305--1433ZETA

SMART

SM00101--14_3_3
SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008067	Aspergillus clavatus	46.27	2.00e-12	67.40
IUUC-Bdi-014293	Brachypodium distachyon	46.15	4.00e-35	141.00
IUUC-Hvu-047313	Hordeum vulgare	50.25	1.00e-32	132.00
IUUC-Lpe-050704	Leersia perrieri	57.53	1.00e-24	105.00
IUUC-Oba-075107	Oryza barthii	81.25	1.00e-19	88.60
IUUC-Ogl-077490	Oryza glaberrima	66.67	2.00e-22	98.60
IUUC-Ogu-078358	Oryza glumaepatula	66.67	2.00e-22	98.60
IUUC-Oin-079942	Oryza indica	66.67	3.00e-22	97.80
IUUC-Ome-082017	Oryza meridionalis	66.30	2.00e-22	99.00
IUUC-Opu-083965	Oryza punctata	58.39	2.00e-22	98.20
IUUC-Oru-084479	Oryza rufipogon	66.67	2.00e-22	98.60
IUUC-Osa-085613	Oryza sativa	66.67	2.00e-22	98.60
IUUC-Sit-110143	Setaria italica	71.43	2.00e-24	104.00
IUUC-Sbi-114595	Sorghum bicolor	77.72	2.00e-66	245.00
IUUC-Tae-124784	Triticum aestivum	49.52	5.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence