iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050635

Ensembl Protein ID

ENSLACP00000005552.1

UniProt Accession

H3A7D1; H3A7D1_LATCH

Genbank Protein ID

ENSLACP00000005552

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01115619

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000004936.1	ENSLACT00000005601.1	ENSLACP00000005552.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-08	33.5	238	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++   ++ +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 238  CAICLDEYlegDK-LRILPCSHAYHCKCVDPW-----LTKTKKTCPICK 280
           ********99555.******************.....899********6 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MLLSLGMLLL SATQIYTILT VQLFAYLNLL PVEADIQAYL KNETQFFDDL PARFGHRLCS 60
KGLKGFLISS KPENACEPID PPPLKDNSTT FIVLIRRLDC NFDIKVLNAQ RAGYKAAIVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGATTTCC GTGTCCAGCA GCTGTTCAGT GTTGACATTC TCTAGGAAGG CGTCTGGAAC 60
AGCGGGGATG TGGGTAGGGT TTTACTGCAG TGCTTTTTGA AATAATACCC ATTTAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

lcm:102363943

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	81.35	3.00e-144	504.00
IUUC-Atr-003055	Amborella trichopoda	29.97	7.00e-30	124.00
IUUC-Apl-004022	Anas platyrhynchos	83.49	3.00e-144	504.00
IUUC-Aca-004641	Anolis carolinensis	81.48	2.00e-139	488.00
IUUC-Aly-006519	Arabidopsis lyrata	35.57	7.00e-35	140.00
IUUC-Ath-006590	Arabidopsis thaliana	35.57	2.00e-33	135.00
IUUC-Acl-008363	Aspergillus clavatus	37.80	5.00e-14	72.40
IUUC-Afl-008601	Aspergillus flavus	46.00	2.00e-13	70.50
IUUC-Afu-008769	Aspergillus fumigatus	50.00	1.00e-12	68.90
IUUC-Ani-009169	Aspergillus nidulans	36.63	1.00e-15	77.80
IUUC-Ang-009613	Aspergillus niger	45.83	1.00e-12	67.80
IUUC-Aor-010062	Aspergillus oryzae	46.00	4.00e-13	68.60
IUUC-Ate-010341	Aspergillus terreus	41.33	3.00e-13	69.70
IUUC-Ame-010635	Astyanax mexicanus	72.91	1.00e-137	482.00
IUUC-Bgr-012131	Blumeria graminis	44.00	6.00e-14	72.80
IUUC-Bta-012593	Bos taurus	78.67	2.00e-149	521.00
IUUC-Bci-013936	Botrytis cinerea	35.14	4.00e-13	69.30
IUUC-Bol-015569	Brassica oleracea	33.73	2.00e-31	130.00
IUUC-Bra-017689	Brassica rapa	32.98	8.00e-32	131.00
IUUC-Cel-018181	Caenorhabditis elegans	32.76	6.00e-27	115.00
IUUC-Cja-019353	Callithrix jacchus	81.35	3.00e-144	504.00
IUUC-Cfa-020234	Canis familiaris	81.96	1.00e-144	505.00
IUUC-Cpo-021602	Cavia porcellus	80.54	6.00e-127	446.00
IUUC-Csa-023201	Chlorocebus sabaeus	81.35	5.00e-144	503.00
IUUC-Cho-024954	Choloepus hoffmanni	66.97	2.00e-107	382.00
IUUC-Cin-025554	Ciona intestinalis	43.73	6.00e-59	220.00
IUUC-Cgl-026485	Colletotrichum gloeosporioides	50.00	3.00e-12	67.40
IUUC-Dre-028744	Danio rerio	80.00	1.00e-138	485.00
IUUC-Dno-029675	Dasypus novemcinctus	81.35	2.00e-144	505.00
IUUC-Dor-030791	Dipodomys ordii	66.56	2.00e-104	372.00
IUUC-Dse-031406	Dothistroma septosporum	36.99	1.00e-12	68.90
IUUC-Dme-031765	Drosophila melanogaster	40.78	2.00e-50	193.00
IUUC-Ete-032577	Echinops telfairi	75.08	3.00e-122	431.00
IUUC-Eca-034148	Equus caballus	80.43	2.00e-142	498.00
IUUC-Eeu-034552	Erinaceus europaeus	82.57	3.00e-142	498.00
IUUC-Fca-036021	Felis catus	81.96	1.00e-144	505.00
IUUC-Fal-037621	Ficedula albicollis	83.33	3.00e-143	501.00
IUUC-Fox-037674	Fusarium oxysporum	50.00	3.00e-12	67.00
IUUC-Fso-038102	Fusarium solani	50.00	1.00e-12	68.60
IUUC-Gmo-039485	Gadus morhua	76.32	8.00e-130	456.00
IUUC-Ggr-040021	Gaeumannomyces graminis	44.44	2.00e-13	70.50
IUUC-Gga-041166	Gallus gallus	83.18	2.00e-144	504.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.25	2.00e-128	451.00
IUUC-Gma-043776	Glycine max	31.91	1.00e-28	121.00
IUUC-Ggo-045344	Gorilla gorilla	81.65	1.00e-144	505.00
IUUC-Hsa-045960	Homo sapiens	81.65	1.00e-144	505.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	81.35	6.00e-145	506.00
IUUC-Lpe-051192	Leersia perrieri	31.85	1.00e-30	127.00
IUUC-Loc-052869	Lepisosteus oculatus	79.51	2.00e-140	491.00
IUUC-Laf-054477	Loxodonta africana	81.29	7.00e-143	499.00
IUUC-Mcc-055232	Macaca mulatta	81.35	5.00e-144	503.00
IUUC-Meu-056237	Macropus eugenii	72.16	2.00e-99	354.00
IUUC-Mor-056917	Magnaporthe oryzae	42.86	3.00e-13	70.10
IUUC-Mpo-057522	Magnaporthe poae	44.44	2.00e-13	70.10
IUUC-Mtr-058129	Medicago truncatula	31.78	3.00e-28	119.00
IUUC-Mga-059780	Meleagris gallopavo	82.87	3.00e-144	504.00
IUUC-Mmr-061384	Microcebus murinus	82.26	4.00e-145	507.00
IUUC-Mdo-062781	Monodelphis domestica	81.35	1.00e-143	502.00
IUUC-Mmu-063727	Mus musculus	80.12	5.00e-129	454.00
IUUC-Mac-064645	Musa acuminata	31.43	5.00e-32	132.00
IUUC-Mpu-066497	Mustela putorius furo	81.65	2.00e-144	504.00
IUUC-Mlu-067654	Myotis lucifugus	82.88	1.00e-96	345.00
IUUC-Nfi-068450	Neosartorya fischeri	46.00	3.00e-13	70.10
IUUC-Ncr-068802	Neurospora crassa	40.79	1.00e-13	71.60
IUUC-Nle-069368	Nomascus leucogenys	81.65	1.00e-144	505.00
IUUC-Opr-070934	Ochotona princeps	54.63	1.00e-75	276.00
IUUC-Ont-071868	Oreochromis niloticus	77.99	1.00e-130	459.00
IUUC-Oan-072733	Ornithorhynchus anatinus	79.66	7.00e-94	336.00
IUUC-Ocu-074083	Oryctolagus cuniculus	80.73	6.00e-143	500.00
IUUC-Oba-075841	Oryza barthii	31.11	6.00e-28	118.00
IUUC-Obr-076703	Oryza brachyantha	32.88	3.00e-31	129.00
IUUC-Ogl-077861	Oryza glaberrima	32.88	5.00e-31	129.00
IUUC-Ogu-078205	Oryza glumaepatula	33.08	9.00e-29	121.00
IUUC-Olo-081024	Oryza longistaminata	32.54	3.00e-30	127.00
IUUC-Ome-081844	Oryza meridionalis	32.88	3.00e-31	129.00
IUUC-Oni-082382	Oryza nivara	33.44	1.00e-32	134.00
IUUC-Opu-083162	Oryza punctata	33.78	3.00e-33	136.00
IUUC-Oru-085099	Oryza rufipogon	31.11	1.00e-27	117.00
IUUC-Osa-086175	Oryza sativa	32.88	3.00e-31	129.00
IUUC-Ola-086440	Oryzias latipes	71.24	2.00e-110	392.00
IUUC-Oga-088291	Otolemur garnettii	75.91	7.00e-133	466.00
IUUC-Oar-089911	Ovis aries	78.67	2.00e-149	521.00
IUUC-Ptr-091166	Pan troglodytes	81.65	1.00e-144	505.00
IUUC-Pan-092154	Papio anubis	81.35	5.00e-144	503.00
IUUC-Psi-093062	Pelodiscus sinensis	82.57	4.00e-139	487.00
IUUC-Pma-094545	Petromyzon marinus	71.43	9.00e-25	104.00
IUUC-Ppa-095421	Physcomitrella patens	31.76	2.00e-32	133.00
IUUC-Pfo-097232	Poecilia formosa	77.67	5.00e-125	440.00
IUUC-Pab-097909	Pongo abelii	81.65	5.00e-145	506.00
IUUC-Pca-100724	Procavia capensis	67.89	1.00e-111	396.00
IUUC-Ppe-101605	Prunus persica	33.33	4.00e-28	118.00
IUUC-Pva-102624	Pteropus vampyrus	76.45	3.00e-128	451.00
IUUC-Rno-105109	Rattus norvegicus	80.70	2.00e-124	438.00
IUUC-Sha-107563	Sarcophilus harrisii	81.35	2.00e-143	501.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.09	4.00e-18	85.10
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	9.00e-13	67.80
IUUC-Smo-109274	Selaginella moellendorffii	34.12	2.00e-29	122.00
IUUC-Sly-110842	Solanum lycopersicum	28.48	4.00e-29	122.00
IUUC-Stu-112408	Solanum tuberosum	30.57	6.00e-28	118.00
IUUC-Sre-115097	Sporisorium reilianum	51.02	1.00e-12	68.20
IUUC-Ssc-116043	Sus scrofa	82.10	9.00e-144	502.00
IUUC-Tgu-116908	Taeniopygia guttata	82.32	9.00e-142	496.00
IUUC-Tru-118219	Takifugu rubripes	77.60	5.00e-131	460.00
IUUC-Tsy-119333	Tarsius syrichta	81.96	4.00e-145	507.00
IUUC-Tni-120332	Tetraodon nigroviridis	74.31	1.00e-90	325.00
IUUC-Tca-121333	Theobroma cacao	30.58	7.00e-25	107.00
IUUC-Tre-121978	Trichoderma reesei	46.51	1.00e-12	67.80
IUUC-Tae-125320	Triticum aestivum	32.36	1.00e-27	116.00
IUUC-Tme-126894	Tuber melanosporum	42.31	5.00e-13	69.30
IUUC-Tbe-127859	Tupaia belangeri	71.39	5.00e-130	457.00
IUUC-Ttr-129219	Tursiops truncatus	73.39	3.00e-121	428.00
IUUC-Uma-129559	Ustilago maydis	52.08	2.00e-12	67.80
IUUC-Vda-129899	Verticillium dahliae	43.40	1.00e-12	67.80
IUUC-Vpa-130314	Vicugna pacos	78.90	2.00e-133	468.00
IUUC-Vvi-131355	Vitis vinifera	30.27	1.00e-27	117.00
IUUC-Xtr-132114	Xenopus tropicalis	76.03	8.00e-124	436.00
IUUC-Xma-133474	Xiphophorus maculatus	77.67	1.00e-125	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence