iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011779	Zm00001d011779_T002	Zm00001d011779_T002
Zm00001d011779	Zm00001d011779_T015	Zm00001d011779_T015
Zm00001d011779	Zm00001d011779_T003	Zm00001d011779_T003
Zm00001d011779	Zm00001d011779_T004	Zm00001d011779_T004
Zm00001d011779	Zm00001d011779_T005	Zm00001d011779_T005
Zm00001d011779	Zm00001d011779_T009	Zm00001d011779_T009
Zm00001d011779	Zm00001d011779_T008	Zm00001d011779_T008
Zm00001d011779	Zm00001d011779_T012	Zm00001d011779_T012

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-34	118.9	414	451
UBD/Beta-Prp	2.80e-58	199.5	331	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H ++vt+la+  s+++++sG+ Dg++++WD  +g++ +
   Q: 414  HDEGVTSLAWlgSSRYVASGCIDGKVRIWDSLSGDCAR 451
           9999*******866****************99999975 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           h+++ t++++  d+++ v+gs+D  ++  ++++g++v +l gh+ s+ ++ +s s  ++++Gs d+ + +wdl +++    +  +hd+ v
   Q: 331  HTDGLTCLSMTLDSQTVVSGSKDSSVHAVNVNSGQIVGSLVGHTTSIECVGISSSYGWVATGSMDQKLIIWDLTHQSSR--CTCEHDEGV 418
           899***********************999******************************************99876665..899****** PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           +++++ +++++++sG+ D++vr+Wd+ +g++ r+++g h d v+s++++ +g+ +vs+s dg+ +++d++
   Q: 419  TSLAWLGSSRYVASGCIDGKVRIWDSLSGDCAREFSG-HADVVQSMAITADGNAMVSVSSDGSARVFDIS 487
           ************************************9.******************************96 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSISGELPGE GSDGEEEVFI DEEDIIHEIT IDEEDLPDRD EEDDDVGDGI GRGGFCLELQ 60
LSVYAKFSLS APPFFCQLAS QIVLEEIEKP ADDDVLSCSI TFHDLHLSHQ QCFIMQSNGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCCCCTGC CGCGCGCCCG CGATCCACCC CGTTTCGACT GCTCGCCTGC TGCGTGCTGC 60
CTGCTGTCTA CGGCCTCATA CGACTGCCCT GCGCCCCTCG TGGCTTCTGC GGTTCTGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001480--Bulb-type_lectin_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence