iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069657

Ensembl Protein ID

ENSNLEP00000006599.1

UniProt Accession

G1R078; G1R078_NOMLE

Genbank Protein ID

ENSNLEP00000006599

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01013891

Gene Name

UTP4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000005420.2	ENSNLET00000006931.2	ENSNLEP00000006599.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-15	55.0	145	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++++ +l++ ++ t++++Gs D  i v+D+++g  +
   Q: 145  KSRILSLSWhPSgTHIAAGSID-YISVFDVKSGSTV 179
           6889******666*********.9******999876 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MGEFKVHRVR FFNYVPSGIR CVAYNNQSNR LAVSRTDGTV EIYNLSANYF QEKFFPGHES 60
RATEALCWAE GQRLFSAGLN GEIMEYDLQA LNIKYAMDAF GGPIWSMAAS PSGSQLLVGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCTCGCTC CCCGCGGCCT CCCGTGCCCC CCGCCCGCGG CCTGACCTGC AATGGCGGCC 60
GCCGAGCGCG GCGCCGCGCG GCCAACGGGC GACAACCGAA CCTCCCGCCG CCGTCGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005694--C:chromosome
GO:0001650--C:fibrillar center
GO:0034455--C:t-UTP complex
GO:0003723--F:RNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

nle:100597751

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	24.92	5.00e-47	182.00
IUUC-Aml-001310	Ailuropoda melanoleuca	94.61	0.00e+00	1379.00
IUUC-Atr-003076	Amborella trichopoda	23.13	3.00e-36	146.00
IUUC-Apl-003367	Anas platyrhynchos	61.14	9.00e-61	225.00
IUUC-Aca-004429	Anolis carolinensis	61.07	2.00e-146	511.00
IUUC-Aly-006271	Arabidopsis lyrata	23.79	4.00e-43	169.00
IUUC-Ath-007331	Arabidopsis thaliana	25.04	4.00e-41	163.00
IUUC-Ago-007843	Ashbya gossypii	27.16	8.00e-41	162.00
IUUC-Acl-008229	Aspergillus clavatus	26.48	4.00e-40	160.00
IUUC-Afl-008438	Aspergillus flavus	25.84	1.00e-39	158.00
IUUC-Afu-008910	Aspergillus fumigatus	25.19	2.00e-38	154.00
IUUC-Ani-009321	Aspergillus nidulans	29.78	5.00e-40	159.00
IUUC-Ang-009592	Aspergillus niger	27.19	2.00e-41	164.00
IUUC-Aor-010220	Aspergillus oryzae	25.56	8.00e-40	159.00
IUUC-Ate-010317	Aspergillus terreus	25.52	5.00e-39	156.00
IUUC-Ame-010957	Astyanax mexicanus	54.29	0.00e+00	792.00
IUUC-Bgr-012057	Blumeria graminis	26.16	2.00e-36	147.00
IUUC-Bta-012473	Bos taurus	91.41	0.00e+00	1333.00
IUUC-Bdi-014203	Brachypodium distachyon	22.72	8.00e-44	172.00
IUUC-Bol-016163	Brassica oleracea	24.43	7.00e-49	189.00
IUUC-Bra-017482	Brassica rapa	24.01	1.00e-48	187.00
IUUC-Cja-019942	Callithrix jacchus	97.38	0.00e+00	1400.00
IUUC-Cfa-020549	Canis familiaris	95.23	0.00e+00	962.00
IUUC-Cpo-022088	Cavia porcellus	94.46	0.00e+00	1349.00
IUUC-Csa-023773	Chlorocebus sabaeus	98.25	0.00e+00	1409.00
IUUC-Cho-024302	Choloepus hoffmanni	91.92	0.00e+00	1092.00
IUUC-Cin-025384	Ciona intestinalis	34.34	2.00e-118	419.00
IUUC-Dre-027460	Danio rerio	53.42	0.00e+00	776.00
IUUC-Dno-029594	Dasypus novemcinctus	92.66	0.00e+00	1304.00
IUUC-Dor-030564	Dipodomys ordii	89.09	0.00e+00	819.00
IUUC-Dse-031179	Dothistroma septosporum	26.27	1.00e-37	151.00
IUUC-Dme-031603	Drosophila melanogaster	24.47	6.00e-56	212.00
IUUC-Ete-032655	Echinops telfairi	85.28	0.00e+00	1227.00
IUUC-Eca-033838	Equus caballus	94.46	0.00e+00	1369.00
IUUC-Eeu-034548	Erinaceus europaeus	90.09	0.00e+00	1297.00
IUUC-Fca-035715	Felis catus	95.04	0.00e+00	1380.00
IUUC-Fal-037394	Ficedula albicollis	58.12	0.00e+00	776.00
IUUC-Gmo-039235	Gadus morhua	47.96	0.00e+00	689.00
IUUC-Ggr-040043	Gaeumannomyces graminis	26.78	7.00e-32	132.00
IUUC-Gga-041172	Gallus gallus	61.20	0.00e+00	890.00
IUUC-Gac-042466	Gasterosteus aculeatus	52.92	0.00e+00	772.00
IUUC-Gma-044222	Glycine max	24.82	2.00e-42	167.00
IUUC-Ggo-045416	Gorilla gorilla	95.34	0.00e+00	1353.00
IUUC-Hsa-046115	Homo sapiens	98.95	0.00e+00	1379.00
IUUC-Hvu-047229	Hordeum vulgare	23.94	3.00e-43	170.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	94.75	0.00e+00	1368.00
IUUC-Kpa-049370	Komagataella pastoris	21.05	7.00e-33	135.00
IUUC-Lch-050153	Latimeria chalumnae	59.37	0.00e+00	857.00
IUUC-Lpe-051220	Leersia perrieri	24.91	3.00e-48	186.00
IUUC-Loc-052617	Lepisosteus oculatus	54.32	0.00e+00	809.00
IUUC-Laf-053613	Loxodonta africana	91.40	0.00e+00	1323.00
IUUC-Mcc-055707	Macaca mulatta	98.05	0.00e+00	1373.00
IUUC-Meu-056800	Macropus eugenii	62.39	0.00e+00	882.00
IUUC-Mor-057245	Magnaporthe oryzae	26.95	2.00e-30	127.00
IUUC-Mpo-057446	Magnaporthe poae	28.02	1.00e-31	132.00
IUUC-Mtr-058748	Medicago truncatula	23.15	4.00e-44	172.00
IUUC-Mga-060018	Meleagris gallopavo	60.91	0.00e+00	860.00
IUUC-Mmr-061115	Microcebus murinus	95.63	0.00e+00	1360.00
IUUC-Mdo-062235	Monodelphis domestica	77.41	0.00e+00	1152.00
IUUC-Mmu-063158	Mus musculus	90.09	0.00e+00	1321.00
IUUC-Mac-065380	Musa acuminata	24.40	9.00e-53	201.00
IUUC-Mpu-065805	Mustela putorius furo	94.17	0.00e+00	1374.00
IUUC-Mlu-066951	Myotis lucifugus	92.71	0.00e+00	1345.00
IUUC-Nfi-068295	Neosartorya fischeri	25.57	4.00e-39	156.00
IUUC-Ncr-068880	Neurospora crassa	26.02	4.00e-37	150.00
IUUC-Opr-070250	Ochotona princeps	91.55	0.00e+00	1321.00
IUUC-Ont-072642	Oreochromis niloticus	52.40	0.00e+00	732.00
IUUC-Ocu-074741	Oryctolagus cuniculus	93.88	0.00e+00	1361.00
IUUC-Oba-074974	Oryza barthii	24.49	1.00e-47	184.00
IUUC-Obr-076586	Oryza brachyantha	24.81	2.00e-43	171.00
IUUC-Ogl-077782	Oryza glaberrima	24.64	4.00e-51	196.00
IUUC-Ogu-078333	Oryza glumaepatula	24.45	1.00e-43	171.00
IUUC-Oin-079852	Oryza indica	24.39	3.00e-50	193.00
IUUC-Olo-080370	Oryza longistaminata	26.22	6.00e-41	162.00
IUUC-Ome-081442	Oryza meridionalis	24.01	6.00e-48	186.00
IUUC-Oni-082341	Oryza nivara	24.45	5.00e-44	172.00
IUUC-Opu-083824	Oryza punctata	24.42	1.00e-42	167.00
IUUC-Oru-084827	Oryza rufipogon	24.38	2.00e-47	184.00
IUUC-Osa-085742	Oryza sativa	24.39	1.00e-50	194.00
IUUC-Ola-086466	Oryzias latipes	53.61	0.00e+00	753.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.21	1.00e-53	204.00
IUUC-Oga-088721	Otolemur garnettii	85.47	0.00e+00	1200.00
IUUC-Oar-089532	Ovis aries	92.27	0.00e+00	1346.00
IUUC-Ptr-091604	Pan troglodytes	98.98	0.00e+00	1421.00
IUUC-Pan-092060	Papio anubis	97.94	0.00e+00	796.00
IUUC-Psi-093070	Pelodiscus sinensis	62.24	0.00e+00	878.00
IUUC-Pma-094201	Petromyzon marinus	49.18	2.00e-141	495.00
IUUC-Ppa-095599	Physcomitrella patens	28.06	2.00e-35	144.00
IUUC-Pfo-097207	Poecilia formosa	51.17	0.00e+00	732.00
IUUC-Pab-097746	Pongo abelii	98.69	0.00e+00	1415.00
IUUC-Pop-099669	Populus trichocarpa	24.48	3.00e-54	206.00
IUUC-Pca-100562	Procavia capensis	77.12	0.00e+00	1046.00
IUUC-Ppe-101747	Prunus persica	23.81	1.00e-49	191.00
IUUC-Pva-103054	Pteropus vampyrus	93.88	0.00e+00	1370.00
IUUC-Pte-104064	Pyrenophora teres	25.51	4.00e-30	126.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	26.29	6.00e-32	132.00
IUUC-Rno-105155	Rattus norvegicus	91.40	0.00e+00	1336.00
IUUC-Sce-106369	Saccharomyces cerevisiae	23.90	9.00e-45	175.00
IUUC-Sha-107149	Sarcophilus harrisii	76.53	0.00e+00	1141.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	28.84	7.00e-67	248.00
IUUC-Spo-108372	Schizosaccharomyces pombe	28.98	9.00e-72	265.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	26.60	2.00e-42	167.00
IUUC-Smo-108851	Selaginella moellendorffii	23.94	8.00e-54	205.00
IUUC-Sit-110454	Setaria italica	24.69	5.00e-45	176.00
IUUC-Sly-111875	Solanum lycopersicum	24.52	2.00e-52	200.00
IUUC-Stu-112275	Solanum tuberosum	23.67	2.00e-46	180.00
IUUC-Sar-113254	Sorex araneus	77.73	0.00e+00	697.00
IUUC-Sbi-114624	Sorghum bicolor	24.53	2.00e-43	171.00
IUUC-Sre-114985	Sporisorium reilianum	20.33	3.00e-16	80.90
IUUC-Tgu-117407	Taeniopygia guttata	60.23	5.00e-149	520.00
IUUC-Tru-118733	Takifugu rubripes	48.10	0.00e+00	695.00
IUUC-Tsy-119213	Tarsius syrichta	84.83	0.00e+00	1077.00
IUUC-Tni-120894	Tetraodon nigroviridis	48.50	2.00e-99	355.00
IUUC-Tca-121606	Theobroma cacao	24.02	3.00e-45	177.00
IUUC-Tre-121958	Trichoderma reesei	26.78	2.00e-38	154.00
IUUC-Tvi-122290	Trichoderma virens	26.64	3.00e-39	156.00
IUUC-Tae-125538	Triticum aestivum	25.04	3.00e-46	180.00
IUUC-Tme-126995	Tuber melanosporum	26.18	3.00e-34	140.00
IUUC-Tbe-127605	Tupaia belangeri	75.43	1.00e-69	257.00
IUUC-Ttr-128720	Tursiops truncatus	92.71	0.00e+00	1341.00
IUUC-Uma-129564	Ustilago maydis	21.08	2.00e-15	78.20
IUUC-Vpa-130412	Vicugna pacos	94.72	3.00e-142	498.00
IUUC-Vvi-131256	Vitis vinifera	25.51	2.00e-50	194.00
IUUC-Xtr-131828	Xenopus tropicalis	55.22	0.00e+00	805.00
IUUC-Xma-133394	Xiphophorus maculatus	51.81	0.00e+00	737.00
IUUC-Yli-134565	Yarrowia lipolytica	28.48	5.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence