iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+  + c+ f s+ tll+sGs D ++++WD+++  +l+
   Q: 191  GHEHNIPCITFnSSgTLLLSGSIDRSLQIWDITSLSCLC 229
           8**********9556******************999986 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MQRDLTVDEF LNYLYINVKE LFTLKEKSFH FWRNSLISCS KTKNFLFVVV GDEVLVYDLK 60
EISSDASEPE PCFYLHCPHE ASSSRQGDIN QDMPNVINNV RCELIGDLEY FITANDCGKV 120

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Nucleotide Sequence
(Fasta)

CAAATTGTTT GCTAAAAAAG AATATTTATA AAATAATGCA AAGAGACCTA ACAGTTGATG 60
AATTCCTAAA CTATCTATAT GTACTGCTTT GTTTACAAAA TTCGATTGTC TTTTACTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR014839--Crt10
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08728--CRT10

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

KEGG

spo:SPBC27B12.05

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008125	Aspergillus clavatus	24.80	3.00e-11	62.00
IUUC-Afu-008888	Aspergillus fumigatus	23.53	1.00e-10	59.70
IUUC-Ani-009282	Aspergillus nidulans	23.70	3.00e-06	45.40
IUUC-Ang-009623	Aspergillus niger	22.80	1.00e-07	50.40
IUUC-Ate-010255	Aspergillus terreus	22.78	3.00e-07	48.90
IUUC-Kpa-049191	Komagataella pastoris	29.03	2.00e-07	48.50
IUUC-Mor-056987	Magnaporthe oryzae	28.24	2.00e-07	48.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence