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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007585
UUCD1 version UUC-ArT-01430
Ensembl Protein ID AT2G40640.1
UniProt Accession Q58FY4; O22871; Q0WUK1; Q67XS7; Q680U6; Q680Z3; Q8GUT1; PUB63_ARATH
Genbank Protein ID AAM14813.1; AEC09857.1; AEC09858.1; AEC09859.1; AAO11670.1; AAX55151.1; BAD43534.1; BAD44504.1; BAE99197.1; BAD43441.1; BAD43487.1
Protein Name U-box domain-containing protein 63; Plant U-box protein 63; RING-type E3 ubiquitin transferase PUB63
Genbank Nucleotide ID AC002336; CP002685; CP002685; CP002685; AY168999; AY954825; AK175771; AK176741; AK227154; AK175678; AK175724
Gene Name PUB63; At2g40640; T2P4.1; T7D17.18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G40640 AT2G40640.8 AT2G40640.8
AT2G40640 AT2G40640.3 AT2G40640.3
AT2G40640 AT2G40640.1 AT2G40640.1
AT2G40640 AT2G40640.6 AT2G40640.6
AT2G40640 AT2G40640.7 AT2G40640.7
AT2G40640 AT2G40640.2 AT2G40640.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Post-translational Modifications (PTMs)
dbPPTdbPTM
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/U-box U-box 18393940
Classification
Family E-value Score Start End
E3 activity/RING/U-box 3.70e-11 43.8 204 272
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
    + + +p+++ lM+d ++lp+G+++ + +++ +++k c++++qp+ e + +Pnl+lr +++a+++e++s
   Q: 204 AILSDPVTGALMNDATILPCGHSFGAGGLKE--VKKMKACFTCSQPTLEGSEKPNLSLRIVVHAFRQEEDS 272
    5689***************************..788888***************************99876 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Functions as an E3 ubiquitin ligase.
Functions as an E3 ubiquitin ligase.
Protein Sequence
(Fasta)
MSHLRRRRFK LSLCALPVSI DRLLNFPAEK QMSVNDSIDP RFVFHVEDES LRFRVGDSGT 60
KIRELETVGD RHFRTQQGFC GNRIEKDETM YSDGDDEEYD VSIRRRTALI QPGIDSGNNY 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007585|E3,U-box|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGACGCGCGT GCTACTCATG TCCCACTTAC GACGACGTCG TTTTAAACTC TCTCTCTGTG 60
CTCTTCCAGT CTCTATCGAT CGCCTTCTGA ATTTTCCGGC GGAAAAGCAA ATGTCCGTTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007585|E3,U-box|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG ath:AT2G40640
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005843 Arabidopsis lyrata 91.04 0.00e+00 648.00
IUUC-Afu-008866 Aspergillus fumigatus 44.44 1.40e+00 27.30
IUUC-Bdi-014337 Brachypodium distachyon 52.43 3.00e-56 211.00
IUUC-Bol-016386 Brassica oleracea 69.00 2.00e-139 488.00
IUUC-Bra-017754 Brassica rapa 71.59 3.00e-136 477.00
IUUC-Mor-057200 Magnaporthe oryzae 27.93 1.40e-02 33.50
IUUC-Nfi-068522 Neosartorya fischeri 44.44 1.40e+00 27.30
Created Date 25-Jun-2017

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