iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058468

Ensembl Protein ID

KEH35148

UniProt Accession

A0A072V192; A0A072V192_MEDTR

Genbank Protein ID

KEH35148.1

Protein Name

RING-H2 zinc finger protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g081030

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g081030	KEH35148	KEH35148

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	33.0	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f  k+++l  p C+Hvfh dC+++w       + + +CPlCr
   Q: 119  CCVCLGEFevKEELLQIPyCKHVFHIDCIHHW------LQSNSTCPLCR 161
           ********9977799999**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNVKKYDVMM SSVPQTASSP PTLPHMYSEE LQLKLYQAFI FSIPILFSII LFLLFYLFYL 60
KRRASSFSPH LLPRINIPPT TYRYYSSSSP RRLDLTVQFL DKLPRVLFDE DLQARDSLCC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGTTTTTT GTCTCTTTTG GGAAGTTGGA ACAAAACTAT TTGTCCTGTT AACCAAAGAA 60
ACGCGACACT GTTTGGTAAG CATGTGCATG CCTCAACTAT AAAGTTTCAT TCATGCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g081030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006218	Arabidopsis lyrata	62.41	2.00e-23	100.00
IUUC-Ath-007578	Arabidopsis thaliana	62.41	3.00e-23	100.00
IUUC-Afu-009114	Aspergillus fumigatus	52.08	2.00e-12	67.40
IUUC-Bol-015082	Brassica oleracea	60.00	2.00e-24	104.00
IUUC-Bra-018105	Brassica rapa	60.25	7.00e-27	112.00
IUUC-Gma-042696	Glycine max	75.69	8.00e-66	242.00
IUUC-Pop-098932	Populus trichocarpa	62.21	4.00e-38	150.00
IUUC-Ppe-101687	Prunus persica	58.49	4.00e-34	137.00
IUUC-Sly-110876	Solanum lycopersicum	59.18	8.00e-30	122.00
IUUC-Stu-112209	Solanum tuberosum	58.00	2.00e-29	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence