iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-070063

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01046590

Gene Name

VPS41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000002939.1	ENSNLET00000003850.1	ENSNLEP00000003667.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	99.65	0.00e+00	1707.00	IUUC-Hsa-047030

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAEAEEQETG SLEESTDESE EEESEEEPKL KYERLSNGVT EILQKDAASC MTVHDKFLAL 60
GTHYGKVYLL DVQGNITQKF DVSPVKINQI SLDESGEHMG VCSEDGKVQV FGLYSGEEFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTGACTCT CCGGTCGCGC CATGGCGGAA GCAGAGGAGC AGGTAAAGGG TGCAGTTGGT 60
AGTTGAGGGC ACAGGGATAT GGAGGCTAGG GTGAGCTGTT TAGGGAGGGT GGAGTGGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50089--ZF_RING_2

Pfam

PF00637--Clathrin

SMART

SM00299--CLH

Gene Ontology

GO:0030123--C:AP-3 adaptor complex
GO:0071439--C:clathrin complex
GO:0030136--C:clathrin-coated vesicle
GO:0030897--C:HOPS complex
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0008270--F:zinc ion binding
GO:0034058--P:endosomal vesicle fusion
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:1902774--P:late endosome to lysosome transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	34.50	3.00e-133	469.00
IUUC-Aml-001435	Ailuropoda melanoleuca	97.10	0.00e+00	1669.00
IUUC-Atr-002975	Amborella trichopoda	36.96	2.00e-159	556.00
IUUC-Apl-003254	Anas platyrhynchos	91.75	0.00e+00	1590.00
IUUC-Aca-005067	Anolis carolinensis	89.11	0.00e+00	1558.00
IUUC-Aly-005839	Arabidopsis lyrata	35.75	2.00e-155	543.00
IUUC-Ath-006625	Arabidopsis thaliana	35.63	1.00e-155	543.00
IUUC-Ago-007960	Ashbya gossypii	25.39	3.00e-67	249.00
IUUC-Acl-008174	Aspergillus clavatus	29.54	6.00e-54	206.00
IUUC-Afl-008524	Aspergillus flavus	42.22	5.00e-38	153.00
IUUC-Afu-009054	Aspergillus fumigatus	28.43	6.00e-58	219.00
IUUC-Ani-009250	Aspergillus nidulans	27.53	3.00e-47	184.00
IUUC-Ang-009665	Aspergillus niger	28.78	2.00e-56	214.00
IUUC-Aor-010230	Aspergillus oryzae	42.22	6.00e-38	153.00
IUUC-Ate-010464	Aspergillus terreus	40.86	9.00e-40	159.00
IUUC-Ame-011311	Astyanax mexicanus	67.30	0.00e+00	1129.00
IUUC-Bgr-012099	Blumeria graminis	25.74	2.00e-49	191.00
IUUC-Bta-013327	Bos taurus	97.31	0.00e+00	1676.00
IUUC-Bci-013660	Botrytis cinerea	27.19	2.00e-49	191.00
IUUC-Bdi-014641	Brachypodium distachyon	35.98	5.00e-145	508.00
IUUC-Bol-015685	Brassica oleracea	35.63	8.00e-156	544.00
IUUC-Bra-016918	Brassica rapa	35.31	3.00e-154	539.00
IUUC-Cel-018385	Caenorhabditis elegans	28.34	2.00e-89	324.00
IUUC-Cja-018994	Callithrix jacchus	99.03	0.00e+00	1686.00
IUUC-Cfa-020405	Canis familiaris	97.46	0.00e+00	1672.00
IUUC-Cpo-022163	Cavia porcellus	96.86	0.00e+00	1655.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	28.36	1.00e-39	158.00
IUUC-Csa-023134	Chlorocebus sabaeus	99.30	0.00e+00	1703.00
IUUC-Cho-024913	Choloepus hoffmanni	85.21	0.00e+00	1375.00
IUUC-Cin-025239	Ciona intestinalis	44.32	0.00e+00	713.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	29.29	1.00e-52	202.00
IUUC-Cne-026799	Cryptococcus neoformans	36.69	2.00e-161	563.00
IUUC-Cme-027200	Cyanidioschyzon merolae	23.45	1.00e-10	62.00
IUUC-Dre-028115	Danio rerio	82.08	0.00e+00	1431.00
IUUC-Dor-030947	Dipodomys ordii	90.98	0.00e+00	1539.00
IUUC-Dse-031544	Dothistroma septosporum	27.29	4.00e-43	170.00
IUUC-Dme-031830	Drosophila melanogaster	38.00	1.00e-155	543.00
IUUC-Ete-033051	Echinops telfairi	93.80	8.00e-144	504.00
IUUC-Eca-033501	Equus caballus	97.82	0.00e+00	1677.00
IUUC-Eeu-034555	Erinaceus europaeus	91.54	0.00e+00	883.00
IUUC-Fca-035809	Felis catus	96.60	0.00e+00	1664.00
IUUC-Fal-037056	Ficedula albicollis	92.50	0.00e+00	1594.00
IUUC-Fox-037949	Fusarium oxysporum	27.48	2.00e-47	184.00
IUUC-Fso-038282	Fusarium solani	26.78	6.00e-44	173.00
IUUC-Gmo-038540	Gadus morhua	81.14	0.00e+00	1395.00
IUUC-Ggr-039733	Gaeumannomyces graminis	29.25	2.00e-51	198.00
IUUC-Gga-040446	Gallus gallus	91.92	0.00e+00	1593.00
IUUC-Gac-041462	Gasterosteus aculeatus	81.62	0.00e+00	1409.00
IUUC-Gma-043148	Glycine max	36.36	7.00e-161	561.00
IUUC-Hsa-047030	Homo sapiens	99.65	0.00e+00	1707.00
IUUC-Hvu-047693	Hordeum vulgare	35.85	7.00e-146	511.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	96.79	0.00e+00	1655.00
IUUC-Kpa-049224	Komagataella pastoris	24.57	2.00e-55	211.00
IUUC-Lch-049444	Latimeria chalumnae	81.22	0.00e+00	1373.00
IUUC-Lpe-050942	Leersia perrieri	33.72	3.00e-126	446.00
IUUC-Loc-052260	Lepisosteus oculatus	81.52	0.00e+00	1427.00
IUUC-Lma-053173	Leptosphaeria maculans	26.79	4.00e-48	187.00
IUUC-Laf-054185	Loxodonta africana	97.10	0.00e+00	1666.00
IUUC-Mcc-054816	Macaca mulatta	99.30	0.00e+00	1703.00
IUUC-Meu-056483	Macropus eugenii	73.15	0.00e+00	649.00
IUUC-Mor-056979	Magnaporthe oryzae	27.21	3.00e-52	200.00
IUUC-Mpo-057312	Magnaporthe poae	29.35	5.00e-51	196.00
IUUC-Mtr-057630	Medicago truncatula	35.97	7.00e-158	551.00
IUUC-Mla-058930	Melampsora laricipopulina	32.76	2.00e-24	105.00
IUUC-Mga-059942	Meleagris gallopavo	91.79	0.00e+00	1579.00
IUUC-Mvi-060386	Microbotryum violaceum	35.85	2.00e-156	546.00
IUUC-Mmr-060640	Microcebus murinus	98.67	0.00e+00	1689.00
IUUC-Mdo-062934	Monodelphis domestica	85.47	0.00e+00	1422.00
IUUC-Mmu-063488	Mus musculus	96.98	0.00e+00	1675.00
IUUC-Mac-064975	Musa acuminata	36.96	5.00e-154	538.00
IUUC-Mpu-065777	Mustela putorius furo	97.70	0.00e+00	1673.00
IUUC-Mlu-068052	Myotis lucifugus	96.74	0.00e+00	1660.00
IUUC-Nfi-068436	Neosartorya fischeri	28.71	4.00e-59	223.00
IUUC-Ncr-068840	Neurospora crassa	29.51	5.00e-58	220.00
IUUC-Opr-070385	Ochotona princeps	87.18	0.00e+00	1446.00
IUUC-Ont-072367	Oreochromis niloticus	81.40	0.00e+00	1402.00
IUUC-Oan-073085	Ornithorhynchus anatinus	91.43	0.00e+00	1566.00
IUUC-Ocu-074672	Oryctolagus cuniculus	97.70	0.00e+00	1674.00
IUUC-Oba-075574	Oryza barthii	36.31	2.00e-151	530.00
IUUC-Obr-076203	Oryza brachyantha	36.32	5.00e-151	528.00
IUUC-Ogl-077909	Oryza glaberrima	36.31	2.00e-151	530.00
IUUC-Ogu-078053	Oryza glumaepatula	35.90	1.00e-148	520.00
IUUC-Oin-079700	Oryza indica	36.31	2.00e-151	530.00
IUUC-Olo-080707	Oryza longistaminata	36.94	1.00e-157	550.00
IUUC-Oni-082754	Oryza nivara	36.24	2.00e-150	526.00
IUUC-Opu-083854	Oryza punctata	36.24	2.00e-150	526.00
IUUC-Oru-085071	Oryza rufipogon	36.01	1.00e-149	523.00
IUUC-Osa-085370	Oryza sativa	36.31	2.00e-151	530.00
IUUC-Ola-086362	Oryzias latipes	79.27	0.00e+00	1367.00
IUUC-Oga-088078	Otolemur garnettii	97.93	0.00e+00	1665.00
IUUC-Oar-089679	Ovis aries	97.42	0.00e+00	1678.00
IUUC-Ptr-091680	Pan troglodytes	99.65	0.00e+00	1707.00
IUUC-Pan-092816	Papio anubis	99.49	0.00e+00	1207.00
IUUC-Psi-093890	Pelodiscus sinensis	91.10	0.00e+00	1590.00
IUUC-Pma-094654	Petromyzon marinus	65.30	0.00e+00	1118.00
IUUC-Pno-095071	Phaeosphaeria nodorum	27.88	1.00e-54	208.00
IUUC-Ppa-095198	Physcomitrella patens	34.44	2.00e-144	506.00
IUUC-Pfo-097465	Poecilia formosa	80.09	0.00e+00	1387.00
IUUC-Pab-098686	Pongo abelii	99.53	0.00e+00	1705.00
IUUC-Pop-100066	Populus trichocarpa	36.13	6.00e-159	555.00
IUUC-Pca-100990	Procavia capensis	86.94	0.00e+00	1451.00
IUUC-Ppe-101500	Prunus persica	36.77	8.00e-161	561.00
IUUC-Pva-102809	Pteropus vampyrus	97.19	0.00e+00	1676.00
IUUC-Pgr-103404	Puccinia graminis	32.75	1.00e-140	493.00
IUUC-Ptt-103952	Puccinia triticina	31.63	1.00e-129	457.00
IUUC-Pte-104216	Pyrenophora teres	27.55	2.00e-54	208.00
IUUC-Rno-105949	Rattus norvegicus	97.01	0.00e+00	1486.00
IUUC-Sce-106462	Saccharomyces cerevisiae	24.66	4.00e-56	213.00
IUUC-Sha-106689	Sarcophilus harrisii	93.11	0.00e+00	1615.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	30.03	2.00e-95	343.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.18	3.00e-104	372.00
IUUC-Smo-109505	Selaginella moellendorffii	36.88	3.00e-147	515.00
IUUC-Sit-110176	Setaria italica	36.16	9.00e-156	544.00
IUUC-Sly-111671	Solanum lycopersicum	34.67	3.00e-159	555.00
IUUC-Sar-113073	Sorex araneus	82.95	0.00e+00	1280.00
IUUC-Sbi-114139	Sorghum bicolor	36.96	9.00e-150	524.00
IUUC-Sre-115158	Sporisorium reilianum	35.90	3.00e-164	573.00
IUUC-Ssc-115894	Sus scrofa	95.43	0.00e+00	1642.00
IUUC-Tgu-117481	Taeniopygia guttata	92.14	0.00e+00	1593.00
IUUC-Tru-118468	Takifugu rubripes	79.55	0.00e+00	1379.00
IUUC-Tni-120478	Tetraodon nigroviridis	78.96	0.00e+00	1370.00
IUUC-Tca-121780	Theobroma cacao	36.20	3.00e-158	552.00
IUUC-Tre-121900	Trichoderma reesei	27.96	8.00e-54	206.00
IUUC-Tvi-122343	Trichoderma virens	27.70	4.00e-54	207.00
IUUC-Tae-123578	Triticum aestivum	36.38	2.00e-148	519.00
IUUC-Tur-126430	Triticum urartu	35.59	5.00e-140	491.00
IUUC-Tme-127007	Tuber melanosporum	28.77	4.00e-60	226.00
IUUC-Tbe-128073	Tupaia belangeri	88.76	0.00e+00	1500.00
IUUC-Ttr-128879	Tursiops truncatus	96.84	0.00e+00	1659.00
IUUC-Uma-129356	Ustilago maydis	35.38	1.00e-164	574.00
IUUC-Vda-129676	Verticillium dahliae	28.52	2.00e-53	204.00
IUUC-Vvi-131744	Vitis vinifera	35.80	2.00e-156	546.00
IUUC-Xtr-132093	Xenopus tropicalis	81.14	0.00e+00	1390.00
IUUC-Xma-133199	Xiphophorus maculatus	80.91	0.00e+00	1385.00
IUUC-Yli-134385	Yarrowia lipolytica	26.93	2.00e-75	277.00
IUUC-Zma-135567	Zea mays	36.70	2.00e-147	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence