iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042720

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000844

Gene Name

LOC100805404; GLYMA_11G120700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G12850	GLYMA11G12850.1	GLYMA11G12850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-29	99.8	16	48
UBD/Beta-Prp	2.60e-53	182.8	12	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH+d+v++++   s   ++++s+D t+++W+l++
   Q: 16   GHEDDVRGICVcgS-EGIATSSRDRTVRLWSLDD 48
           8********98765.448*************977 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdlstgkcvh 88
           ++l+gh+++v   +++  +++ +at+srd+t+++w++++  +    + l gh+++v  + ++p  +       v+g+ D +++vwdl+tg+ vh
   Q: 12   CELRGHEDDVRG-ICV-CGSEGIATSSRDRTVRLWSLDDSRKfvsSKILLGHTSFVGPLAWIPPNSefphgGVVSGGMDTLVCVWDLKTGEKVH 103
           89999***9998.666.48889*****************9888878889***********999877788889********************** PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           tlkgh+ +v+ ++f+     +vs s d t++ w  ++gq +e   + h++ v+ v   p +  lv+Gs D+t++lW+   +++l+t++g h d 
   Q: 104  TLKGHQLQVTGIAFDD--GDVVSSSVDCTLKRW--RNGQSVE-WWEAHKAPVQAVIKLP-SGELVTGSSDSTLKLWRG--KTCLHTFQG-HSDT 188
           ****************..99*************..******9.9999999888776666.46789***********66..99******9.**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfg 276
           v++ls+ s g  ++s+s+dg+++lw + +ge+++++ ght+ v+sv+ +  + ++vsgs+D   ++W  + g ++++++++   v+  ++  ++
   Q: 189  VRCLSVMS-GLGILSASHDGSLRLWAV-SGEVLMEMVGHTAIVYSVDSH-ASGLIVSGSEDHFAKVW--KDGVCVQSIEHPG-CVWDAKF--ME 274
           ******99.68****************.999******************.9****************..89********987.9******..** PP
   S: 277  dnvlvlgsedskvniwklkkne 298
           +  +v++ +d+ v+iw +++++
   Q: 275  NGDIVTACSDGVVRIWTVDQDN 296
           *****************98765 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDIDFKEYQL RCELRGHEDD VRGICVCGSE GIATSSRDRT VRLWSLDDSR KFVSSKILLG 60
HTSFVGPLAW IPPNSEFPHG GVVSGGMDTL VCVWDLKTGE KVHTLKGHQL QVTGIAFDDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAAGTGGT GTCTTGCGAA AGAGGAAAAA CTAAAAAGAA AACACCTTTA AAGAAGCAAG 60
CAAGGAAGCC TGCTAGCTTG GTTTGTTTCT GCTGTGAGCT GCGATCCTTA AACCTTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

gmx:100805404

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008316	Aspergillus clavatus	29.28	6.00e-70	258.00
IUUC-Afl-008532	Aspergillus flavus	30.83	3.00e-81	296.00
IUUC-Afu-008950	Aspergillus fumigatus	31.16	1.00e-81	297.00
IUUC-Aor-010086	Aspergillus oryzae	30.83	3.00e-81	296.00
IUUC-Bgr-012292	Blumeria graminis	29.36	7.00e-80	291.00
IUUC-Bdi-014810	Brachypodium distachyon	63.16	0.00e+00	984.00
IUUC-Cel-018703	Caenorhabditis elegans	22.90	2.00e-33	137.00
IUUC-Dse-031385	Dothistroma septosporum	29.99	7.00e-70	258.00
IUUC-Lpe-050821	Leersia perrieri	61.94	0.00e+00	974.00
IUUC-Mpo-057465	Magnaporthe poae	29.10	3.00e-76	280.00
IUUC-Mla-058895	Melampsora laricipopulina	32.23	6.00e-61	228.00
IUUC-Ncr-068622	Neurospora crassa	29.10	2.00e-82	300.00
IUUC-Opr-071013	Ochotona princeps	37.57	1.00e-28	121.00
IUUC-Oba-075226	Oryza barthii	57.56	0.00e+00	876.00
IUUC-Obr-076875	Oryza brachyantha	63.66	0.00e+00	1030.00
IUUC-Ogl-077057	Oryza glaberrima	63.93	0.00e+00	1018.00
IUUC-Ogu-078156	Oryza glumaepatula	64.06	0.00e+00	1018.00
IUUC-Oin-079373	Oryza indica	64.06	0.00e+00	1016.00
IUUC-Ome-081654	Oryza meridionalis	57.56	0.00e+00	876.00
IUUC-Oni-082221	Oryza nivara	58.62	0.00e+00	890.00
IUUC-Oru-084751	Oryza rufipogon	57.56	0.00e+00	872.00
IUUC-Osa-085584	Oryza sativa	64.19	0.00e+00	1019.00
IUUC-Sit-109699	Setaria italica	63.48	0.00e+00	1007.00
IUUC-Sbi-114745	Sorghum bicolor	61.97	0.00e+00	976.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence