iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d036905	Zm00001d036905_T004	Zm00001d036905_T004
Zm00001d036905	Zm00001d036905_T002	Zm00001d036905_T002
Zm00001d036905	Zm00001d036905_T005	Zm00001d036905_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-25	88.0	308	339
UBD/Beta-Prp	1.70e-42	147.6	124	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gH ++v+c++f ++   + +sGs Dgti++W l
   Q: 308  GHHGPVHCVRFaPGgeSY-ASGSEDGTIRIWQL 339
           899*********665567.************86 PP

UBD/Beta-Prp

   S: 75   tikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrl 163
           tikvwd  tg+ +h+++ h++ v++++fs++++ l++G+  +t+rv+d++        l++  g+v+++++  ++  +l s+++ + vrl
   Q: 124  TIKVWDALTGDELHSFE-HKHIVRACAFSEDTHLLLTGGMEKTLRVYDINRPDAAPRELDKSPGSVRTAAWLHSDqTILSSCTDMGGVRL 212
           8****************.*********************************99999999999999999998777747777777779**** PP
   S: 164  Wdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           Wd++tgk+++tl+   + s++s +++++g ++++ ++ ++vk+wd  +
   Q: 213  WDVRTGKIVQTLET--KASITSAEVSQDG-RFITTADGSSVKFWDANH 257
           ************75..***********98.88899999*******875 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MEKKKVAIPL VCHGHSRPVV DLFYSPVTPD GYFLISASKD TNPMLRNGET GDWIGTFQGH 60
KGAVWSCCLD RNALRAASAS ADFSACLLLA GPIFYLLVLL DKWVLRWSLR RLAGDSPRCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCACCCTT CGCCCTTTCA AGGAGGCCGG CCTCGCCTCA CACTCCCGCC CGCCTCCGGC 60
GATTCATCCA CCCAATAAAG TATCCAACCC TAACGATCCG GATCGCCTTA CCCCGCGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence