iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088574

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03105739

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000007399.2	ENSOGAT00000007408.2	ENSOGAP00000006623.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-44	147.7	673	703
UBD/Beta-Prp	5.20e-94	314.8	33	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 673  GHHQEIWCLAVsPSgDYIVSSSHDKSLRLWE 703
           78899*******666***************8 PP

UBD/Beta-Prp

   S: 62   pdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgn 150
            ++  +v +   +++ +wdl++g+ + +l+g +++v++l  sp+g +l++G +d  +r++ l +g+    t++gh+++v+++++++ g 
   Q: 33   GEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSVRIFSLLSGEGNV-TFNGHKAAVTTLKYDQLGG 120
           55555666666677889***************************************************9.******************* PP
   S: 151  llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvs 239
            l+sGs+D+ v +Wd+ +++ l++l+g h+d+++   f ++++ lv+ ++d+tvk wdl t++c +t+ gh++ v+ + + ++++rl++
   Q: 121  RLASGSKDTDVIVWDVINESGLYRLKG-HKDAITQALFLREKNLLVTSGKDTTVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLIT 208
           *************************99.************************************************************* PP
   S: 240  gssDgsiriWdlrsgdllk 258
           g+sD  +r Wd++  + + 
   Q: 209  GASDSELRAWDITYLQEIE 227
           **********998666555 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKHEVTC LCPSPDGLHL AVGYEDGSVR IFSLLSGEGN VTFNGHKAAV TTLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTCA CCAAGCAGTA CCTACGCTAT GTTGCTAGTG CAGTTTTTGG CCTGATTGGC 60
AGCCAAAAAG GTAATATTGT CTTTGTGACA CTTCGTGGTG AGAAAGGACG CTATGTAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.49	9.00e-151	527.00
IUUC-Aml-001245	Ailuropoda melanoleuca	93.85	0.00e+00	1674.00
IUUC-Atr-002700	Amborella trichopoda	39.32	1.00e-175	610.00
IUUC-Apl-004164	Anas platyrhynchos	77.30	0.00e+00	1058.00
IUUC-Aca-004765	Anolis carolinensis	74.84	0.00e+00	1384.00
IUUC-Aly-006503	Arabidopsis lyrata	39.12	1.00e-175	610.00
IUUC-Ath-006848	Arabidopsis thaliana	39.15	2.00e-179	623.00
IUUC-Ago-007909	Ashbya gossypii	34.85	1.00e-145	510.00
IUUC-Acl-008238	Aspergillus clavatus	38.81	0.00e+00	632.00
IUUC-Afl-008544	Aspergillus flavus	38.93	2.00e-175	609.00
IUUC-Afu-008868	Aspergillus fumigatus	39.14	4.00e-179	621.00
IUUC-Ani-009367	Aspergillus nidulans	37.84	1.00e-173	603.00
IUUC-Ang-009732	Aspergillus niger	39.22	1.00e-180	626.00
IUUC-Aor-010140	Aspergillus oryzae	38.99	7.00e-176	611.00
IUUC-Ate-010572	Aspergillus terreus	37.75	2.00e-174	606.00
IUUC-Ame-010956	Astyanax mexicanus	63.62	0.00e+00	1118.00
IUUC-Bgr-012296	Blumeria graminis	37.55	1.00e-173	603.00
IUUC-Bta-012716	Bos taurus	94.38	0.00e+00	1708.00
IUUC-Bci-013699	Botrytis cinerea	37.32	2.00e-163	569.00
IUUC-Bdi-014525	Brachypodium distachyon	37.74	6.00e-161	561.00
IUUC-Bol-015117	Brassica oleracea	39.70	3.00e-173	602.00
IUUC-Bra-016869	Brassica rapa	39.48	7.00e-175	607.00
IUUC-Cel-018570	Caenorhabditis elegans	34.28	4.00e-129	455.00
IUUC-Cja-019425	Callithrix jacchus	93.76	0.00e+00	1677.00
IUUC-Cfa-020787	Canis familiaris	93.11	0.00e+00	1685.00
IUUC-Cpo-021729	Cavia porcellus	93.82	0.00e+00	1185.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.61	4.00e-107	382.00
IUUC-Csa-024098	Chlorocebus sabaeus	95.12	0.00e+00	1697.00
IUUC-Cho-024495	Choloepus hoffmanni	79.36	0.00e+00	950.00
IUUC-Cin-025245	Ciona intestinalis	49.14	1.00e-169	589.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.53	3.00e-166	579.00
IUUC-Cne-026835	Cryptococcus neoformans	47.65	9.00e-127	447.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.49	1.00e-38	155.00
IUUC-Dre-027874	Danio rerio	71.67	0.00e+00	1301.00
IUUC-Dno-028905	Dasypus novemcinctus	92.58	0.00e+00	1677.00
IUUC-Dor-030383	Dipodomys ordii	88.66	0.00e+00	820.00
IUUC-Dse-031297	Dothistroma septosporum	37.23	5.00e-163	568.00
IUUC-Dme-031956	Drosophila melanogaster	42.28	0.00e+00	682.00
IUUC-Ete-032608	Echinops telfairi	83.05	0.00e+00	932.00
IUUC-Eca-034181	Equus caballus	93.11	0.00e+00	1647.00
IUUC-Eeu-034495	Erinaceus europaeus	92.61	0.00e+00	1600.00
IUUC-Fca-035994	Felis catus	93.18	0.00e+00	1569.00
IUUC-Fal-036611	Ficedula albicollis	77.87	0.00e+00	1338.00
IUUC-Fox-037807	Fusarium oxysporum	37.66	4.00e-169	588.00
IUUC-Fso-038090	Fusarium solani	37.51	9.00e-166	577.00
IUUC-Gmo-039018	Gadus morhua	64.31	0.00e+00	700.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.85	1.00e-168	587.00
IUUC-Gga-040707	Gallus gallus	79.35	0.00e+00	1355.00
IUUC-Gac-042334	Gasterosteus aculeatus	64.64	0.00e+00	692.00
IUUC-Gma-043860	Glycine max	38.28	5.00e-171	594.00
IUUC-Ggo-045334	Gorilla gorilla	94.81	0.00e+00	1642.00
IUUC-Hsa-046996	Homo sapiens	94.70	0.00e+00	1644.00
IUUC-Hvu-047381	Hordeum vulgare	34.44	8.00e-90	324.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	93.96	0.00e+00	1659.00
IUUC-Kpa-049185	Komagataella pastoris	34.35	5.00e-149	521.00
IUUC-Lch-050098	Latimeria chalumnae	67.38	0.00e+00	1145.00
IUUC-Lpe-050710	Leersia perrieri	36.61	4.00e-163	568.00
IUUC-Loc-052745	Lepisosteus oculatus	68.86	0.00e+00	1208.00
IUUC-Lma-053104	Leptosphaeria maculans	38.62	6.00e-175	608.00
IUUC-Laf-054395	Loxodonta africana	92.15	0.00e+00	1639.00
IUUC-Mcc-055077	Macaca mulatta	95.02	0.00e+00	1689.00
IUUC-Meu-056418	Macropus eugenii	83.37	0.00e+00	746.00
IUUC-Mor-057031	Magnaporthe oryzae	38.08	3.00e-154	539.00
IUUC-Mpo-057420	Magnaporthe poae	37.55	2.00e-165	576.00
IUUC-Mtr-057838	Medicago truncatula	38.64	0.00e+00	628.00
IUUC-Mla-058854	Melampsora laricipopulina	37.35	3.00e-159	556.00
IUUC-Mga-060120	Meleagris gallopavo	74.51	0.00e+00	1256.00
IUUC-Mvi-060407	Microbotryum violaceum	44.11	3.00e-136	479.00
IUUC-Mmr-060635	Microcebus murinus	94.39	0.00e+00	1664.00
IUUC-Mdo-063023	Monodelphis domestica	87.80	0.00e+00	1608.00
IUUC-Mmu-064103	Mus musculus	90.04	0.00e+00	1614.00
IUUC-Mac-065569	Musa acuminata	38.41	3.00e-171	595.00
IUUC-Mpu-066462	Mustela putorius furo	93.21	0.00e+00	1679.00
IUUC-Mlu-067894	Myotis lucifugus	93.43	0.00e+00	1691.00
IUUC-Nfi-068321	Neosartorya fischeri	39.02	5.00e-178	618.00
IUUC-Ncr-068661	Neurospora crassa	37.81	7.00e-166	578.00
IUUC-Nle-069409	Nomascus leucogenys	94.80	0.00e+00	1660.00
IUUC-Opr-070445	Ochotona princeps	83.17	0.00e+00	1513.00
IUUC-Ont-072339	Oreochromis niloticus	70.35	0.00e+00	1246.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.87	0.00e+00	1366.00
IUUC-Ocu-074227	Oryctolagus cuniculus	94.70	0.00e+00	1716.00
IUUC-Oba-075635	Oryza barthii	36.59	6.00e-156	544.00
IUUC-Obr-076897	Oryza brachyantha	37.47	4.00e-168	585.00
IUUC-Ogl-077555	Oryza glaberrima	36.49	2.00e-155	543.00
IUUC-Ogu-078724	Oryza glumaepatula	36.59	1.00e-156	547.00
IUUC-Oin-080030	Oryza indica	36.59	8.00e-156	544.00
IUUC-Olo-080687	Oryza longistaminata	34.75	2.00e-144	506.00
IUUC-Ome-081867	Oryza meridionalis	36.80	5.00e-157	548.00
IUUC-Oni-082559	Oryza nivara	36.59	1.00e-155	544.00
IUUC-Opu-083332	Oryza punctata	39.16	3.00e-147	516.00
IUUC-Oru-084455	Oryza rufipogon	36.59	7.00e-156	544.00
IUUC-Osa-085793	Oryza sativa	36.59	7.00e-156	544.00
IUUC-Ola-087395	Oryzias latipes	69.22	0.00e+00	1165.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.46	1.00e-158	553.00
IUUC-Oar-089453	Ovis aries	92.80	0.00e+00	1692.00
IUUC-Ptr-090694	Pan troglodytes	94.91	0.00e+00	1642.00
IUUC-Pan-092420	Papio anubis	94.81	0.00e+00	1684.00
IUUC-Psi-093683	Pelodiscus sinensis	82.27	0.00e+00	1485.00
IUUC-Pma-094197	Petromyzon marinus	57.46	7.00e-71	259.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.97	9.00e-174	603.00
IUUC-Ppa-095208	Physcomitrella patens	38.95	5.00e-172	598.00
IUUC-Pfo-096299	Poecilia formosa	69.61	0.00e+00	1262.00
IUUC-Pab-098706	Pongo abelii	94.80	0.00e+00	1654.00
IUUC-Pop-099275	Populus trichocarpa	38.29	1.00e-172	600.00
IUUC-Pca-100796	Procavia capensis	78.09	0.00e+00	1254.00
IUUC-Ppe-101861	Prunus persica	40.55	5.00e-180	625.00
IUUC-Pva-103241	Pteropus vampyrus	88.04	0.00e+00	1509.00
IUUC-Pgr-103432	Puccinia graminis	37.04	7.00e-157	548.00
IUUC-Ptt-103742	Puccinia triticina	39.90	8.00e-107	381.00
IUUC-Pte-104069	Pyrenophora teres	37.49	2.00e-164	572.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.73	3.00e-171	595.00
IUUC-Rno-105219	Rattus norvegicus	89.62	0.00e+00	1572.00
IUUC-Sce-106271	Saccharomyces cerevisiae	33.47	4.00e-130	459.00
IUUC-Sha-107550	Sarcophilus harrisii	87.55	0.00e+00	1602.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.91	1.00e-160	560.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.28	6.00e-168	584.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.04	2.00e-168	586.00
IUUC-Smo-108974	Selaginella moellendorffii	39.47	9.00e-170	590.00
IUUC-Sit-110000	Setaria italica	37.96	4.00e-159	555.00
IUUC-Sly-111595	Solanum lycopersicum	38.42	4.00e-177	615.00
IUUC-Stu-112516	Solanum tuberosum	38.08	7.00e-176	611.00
IUUC-Sar-113195	Sorex araneus	82.73	0.00e+00	1316.00
IUUC-Sbi-114465	Sorghum bicolor	36.46	2.00e-166	579.00
IUUC-Sre-115006	Sporisorium reilianum	34.24	2.00e-149	523.00
IUUC-Ssc-115929	Sus scrofa	93.21	0.00e+00	1637.00
IUUC-Tgu-117282	Taeniopygia guttata	78.09	0.00e+00	1340.00
IUUC-Tru-118406	Takifugu rubripes	68.94	0.00e+00	1204.00
IUUC-Tsy-119170	Tarsius syrichta	93.02	0.00e+00	1678.00
IUUC-Tni-119721	Tetraodon nigroviridis	67.49	0.00e+00	1177.00
IUUC-Tca-121761	Theobroma cacao	39.26	2.00e-180	625.00
IUUC-Tre-121908	Trichoderma reesei	36.52	9.00e-164	570.00
IUUC-Tvi-122547	Trichoderma virens	37.37	9.00e-167	580.00
IUUC-Tae-125496	Triticum aestivum	38.59	3.00e-163	568.00
IUUC-Tur-126811	Triticum urartu	40.12	2.00e-163	569.00
IUUC-Tme-126987	Tuber melanosporum	38.97	2.00e-178	619.00
IUUC-Tbe-127315	Tupaia belangeri	95.20	0.00e+00	879.00
IUUC-Ttr-129165	Tursiops truncatus	85.05	0.00e+00	1434.00
IUUC-Uma-129651	Ustilago maydis	34.46	1.00e-149	523.00
IUUC-Vda-129973	Verticillium dahliae	38.61	3.00e-161	562.00
IUUC-Vpa-130163	Vicugna pacos	83.81	0.00e+00	733.00
IUUC-Vvi-131402	Vitis vinifera	37.43	3.00e-178	619.00
IUUC-Xtr-132296	Xenopus tropicalis	73.71	0.00e+00	1296.00
IUUC-Xma-133028	Xiphophorus maculatus	69.58	0.00e+00	1264.00
IUUC-Yli-134484	Yarrowia lipolytica	38.44	2.00e-155	542.00
IUUC-Zma-135938	Zea mays	35.74	3.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence