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Tag Content
UUCD2 ID IUUC-Pop-099275
UUCD1 version UUC-PoT-01443
Ensembl Protein ID POPTR_0006s12290.1
UniProt Accession B9MTI3; B9MTI3_POPTR
Genbank Protein ID ERP59169.1
Protein Name Transducin family protein
Genbank Nucleotide ID CM000342
Gene Name POPTRDRAFT_836244; POPTR_0006s12290g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s12290 POPTR_0006s12290.1 POPTR_0006s12290.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-45 152.2 150 188
UBD/Beta-Prp 8.00e-119 397.4 38 226
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f  s++ lvs+s D+ ++vWDl t+++ +
   Q: 150  GHRDQVTDLVFleSTKKLVSSSKDKFLRVWDLETQHCMQ 188
           8**********987799******************9986 PP
   

   UBD/Beta-Prp
   S: 115  drtirvwdletgqclee.......tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
            + + vw++++g c ++         sg + +v++++ +p++ +l++ G +D+ +r+Wd++ g++ +tl g h+++v+ l +++ g  l+s
   Q: 38   LEKVGVWHVRQGICTKTlapstssSRSGPSLAVTSIAPSPSSsSLVAVGYADGSIRIWDSEKGTCETTLNG-HKGAVTVLRYNKPGALLAS 127
           57899***********9999988888888899*****999999***************************9.******************* PP
   S: 198  gsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedsk 288
           gs+d++v+lwd+  ++ + +l+gh+d+v+++ f++ ++ lvs s+D+ +r+Wdl+++ +++ +++h+s +++v++ ++++++lv+gs+d +
   Q: 128  GSKDNDVILWDVVGETGLFRLRGHRDQVTDLVFLESTKKLVSSSKDKFLRVWDLETQHCMQIISGHHSEIWAVDA-DPEERYLVTGSADPE 217
           *************9999**********************************************************.*************** PP
   S: 289  vniwklkkn 297
           ++++  k +
   Q: 218  IRFYTIKHD 226
           ****99866 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MVKSYLRYEP ALSFGVIASV EGNIAYDSSG KHLLTPALEK VGVWHVRQGI CTKTLAPSTS 60
SSRSGPSLAV TSIAPSPSSS SLVAVGYADG SIRIWDSEKG TCETTLNGHK GAVTVLRYNK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099275|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGTAACGCC ATAGCAGCCA GCCATAGCAG CAAGCATAAG CAGCAATGGT CAAGTCGTAC 60
CTAAGGTACG AGCCAGCGTT ATCGTTTGGT GTAATAGCAT CGGTGGAAGG TAACATTGCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099275|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG pop:POPTR_0006s12290g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000784 Aegilops tauschii 60.52 0.00e+00 986.00
IUUC-Aml-001245 Ailuropoda melanoleuca 37.97 2.00e-174 605.00
IUUC-Atr-002700 Amborella trichopoda 63.94 0.00e+00 1102.00
IUUC-Apl-004164 Anas platyrhynchos 42.01 2.00e-148 519.00
IUUC-Aca-004765 Anolis carolinensis 39.73 0.00e+00 632.00
IUUC-Aly-006503 Arabidopsis lyrata 69.94 0.00e+00 1262.00
IUUC-Ath-006848 Arabidopsis thaliana 69.72 0.00e+00 1267.00
IUUC-Ago-007909 Ashbya gossypii 32.99 4.00e-140 491.00
IUUC-Acl-008238 Aspergillus clavatus 37.13 7.00e-160 557.00
IUUC-Afl-008544 Aspergillus flavus 36.76 9.00e-155 540.00
IUUC-Afu-008868 Aspergillus fumigatus 36.62 3.00e-156 545.00
IUUC-Ani-009367 Aspergillus nidulans 36.65 1.00e-158 553.00
IUUC-Ang-009732 Aspergillus niger 38.16 1.00e-166 580.00
IUUC-Aor-010140 Aspergillus oryzae 37.21 2.00e-157 549.00
IUUC-Ate-010572 Aspergillus terreus 37.64 6.00e-157 548.00
IUUC-Ame-010956 Astyanax mexicanus 45.71 1.00e-124 440.00
IUUC-Bgr-012296 Blumeria graminis 33.99 4.00e-151 528.00
IUUC-Bta-012716 Bos taurus 38.40 2.00e-180 625.00
IUUC-Bci-013699 Botrytis cinerea 36.15 5.00e-155 541.00
IUUC-Bdi-014525 Brachypodium distachyon 62.86 0.00e+00 1105.00
IUUC-Bol-015117 Brassica oleracea 69.67 0.00e+00 1236.00
IUUC-Bra-016869 Brassica rapa 69.45 0.00e+00 1227.00
IUUC-Cel-018570 Caenorhabditis elegans 28.49 1.00e-91 330.00
IUUC-Cja-019425 Callithrix jacchus 38.77 5.00e-178 617.00
IUUC-Cfa-020787 Canis familiaris 38.77 1.00e-175 609.00
IUUC-Cpo-021729 Cavia porcellus 39.27 6.00e-135 474.00
IUUC-Cre-022678 Chlamydomonas reinhardtii 51.82 3.00e-121 429.00
IUUC-Csa-024098 Chlorocebus sabaeus 38.44 3.00e-179 622.00
IUUC-Cho-024495 Choloepus hoffmanni 35.70 2.00e-94 339.00
IUUC-Cin-025245 Ciona intestinalis 33.86 1.00e-101 363.00
IUUC-Cgl-026708 Colletotrichum gloeosporioides 36.50 3.00e-154 538.00
IUUC-Cne-026835 Cryptococcus neoformans 41.87 1.00e-111 397.00
IUUC-Cme-027162 Cyanidioschyzon merolae 25.78 1.00e-38 155.00
IUUC-Dre-027874 Danio rerio 39.89 2.00e-177 616.00
IUUC-Dno-028905 Dasypus novemcinctus 39.13 2.00e-180 625.00
IUUC-Dor-030383 Dipodomys ordii 34.89 4.00e-71 262.00
IUUC-Dse-031297 Dothistroma septosporum 34.24 4.00e-144 505.00
IUUC-Dme-031956 Drosophila melanogaster 34.18 1.00e-133 469.00
IUUC-Ete-032608 Echinops telfairi 36.02 2.00e-100 358.00
IUUC-Eca-034181 Equus caballus 38.92 2.00e-179 622.00
IUUC-Eeu-034495 Erinaceus europaeus 38.32 3.00e-171 595.00
IUUC-Fca-035994 Felis catus 39.77 2.00e-168 585.00
IUUC-Fal-036611 Ficedula albicollis 38.51 4.00e-176 611.00
IUUC-Fox-037807 Fusarium oxysporum 36.80 5.00e-158 551.00
IUUC-Fso-038090 Fusarium solani 36.11 4.00e-155 541.00
IUUC-Gmo-039018 Gadus morhua 35.53 8.00e-85 307.00
IUUC-Ggr-039748 Gaeumannomyces graminis 35.61 3.00e-156 545.00
IUUC-Gga-040707 Gallus gallus 39.51 2.00e-179 622.00
IUUC-Gac-042334 Gasterosteus aculeatus 33.15 7.00e-78 284.00
IUUC-Gma-043033 Glycine max 75.40 0.00e+00 1352.00
IUUC-Ggo-045334 Gorilla gorilla 38.73 1.00e-178 619.00
IUUC-Hsa-046996 Homo sapiens 38.60 6.00e-179 620.00
IUUC-Hvu-047381 Hordeum vulgare 55.54 6.00e-171 593.00
IUUC-Itr-047938 Ictidomys tridecemlineatus 38.72 4.00e-179 621.00
IUUC-Kpa-049185 Komagataella pastoris 33.65 3.00e-143 502.00
IUUC-Lch-050098 Latimeria chalumnae 37.61 2.00e-157 549.00
IUUC-Lpe-050710 Leersia perrieri 62.01 0.00e+00 1065.00
IUUC-Loc-052745 Lepisosteus oculatus 38.46 1.00e-169 589.00
IUUC-Lma-053104 Leptosphaeria maculans 36.63 1.00e-156 547.00
IUUC-Laf-054395 Loxodonta africana 39.41 6.00e-180 624.00
IUUC-Mcc-055077 Macaca mulatta 38.60 6.00e-178 617.00
IUUC-Meu-056418 Macropus eugenii 42.64 2.00e-99 356.00
IUUC-Mor-057031 Magnaporthe oryzae 35.75 1.00e-140 493.00
IUUC-Mpo-057420 Magnaporthe poae 35.98 1.00e-151 530.00
IUUC-Mtr-057838 Medicago truncatula 73.04 0.00e+00 1324.00
IUUC-Mla-058854 Melampsora laricipopulina 34.31 1.00e-137 483.00
IUUC-Mga-060120 Meleagris gallopavo 41.99 3.00e-134 472.00
IUUC-Mvi-060407 Microbotryum violaceum 41.67 1.00e-127 450.00
IUUC-Mmr-060635 Microcebus murinus 39.85 5.00e-180 624.00
IUUC-Mdo-063023 Monodelphis domestica 39.03 0.00e+00 627.00
IUUC-Mmu-064103 Mus musculus 39.00 0.00e+00 630.00
IUUC-Mac-065569 Musa acuminata 67.20 0.00e+00 1230.00
IUUC-Mpu-066462 Mustela putorius furo 38.32 4.00e-178 618.00
IUUC-Mlu-067894 Myotis lucifugus 38.49 1.00e-178 619.00
IUUC-Nfi-068321 Neosartorya fischeri 37.02 1.00e-157 549.00
IUUC-Ncr-068661 Neurospora crassa 41.02 3.00e-110 392.00
IUUC-Nle-069409 Nomascus leucogenys 38.65 2.00e-180 625.00
IUUC-Opr-070445 Ochotona princeps 42.41 5.00e-124 438.00
IUUC-Ont-072339 Oreochromis niloticus 38.84 1.00e-171 596.00
IUUC-Oan-073688 Ornithorhynchus anatinus 39.45 2.00e-171 595.00
IUUC-Ocu-074227 Oryctolagus cuniculus 38.83 9.00e-180 623.00
IUUC-Oba-075635 Oryza barthii 61.56 0.00e+00 1022.00
IUUC-Obr-076897 Oryza brachyantha 61.94 0.00e+00 1083.00
IUUC-Ogl-077555 Oryza glaberrima 61.46 0.00e+00 1021.00
IUUC-Ogu-078724 Oryza glumaepatula 61.67 0.00e+00 1026.00
IUUC-Oin-080030 Oryza indica 61.78 0.00e+00 1024.00
IUUC-Olo-080687 Oryza longistaminata 58.17 0.00e+00 975.00
IUUC-Ome-081867 Oryza meridionalis 61.46 0.00e+00 1020.00
IUUC-Oni-082559 Oryza nivara 61.78 0.00e+00 1023.00
IUUC-Opu-083332 Oryza punctata 59.74 0.00e+00 936.00
IUUC-Oru-084455 Oryza rufipogon 61.88 0.00e+00 1026.00
IUUC-Osa-085793 Oryza sativa 61.88 0.00e+00 1026.00
IUUC-Ola-087395 Oryzias latipes 53.35 3.00e-101 362.00
IUUC-Olu-087768 Ostreococcus lucimarinus 42.32 6.00e-180 624.00
IUUC-Oga-088574 Otolemur garnettii 38.82 7.00e-180 624.00
IUUC-Oar-089453 Ovis aries 38.07 3.00e-180 625.00
IUUC-Ptr-090694 Pan troglodytes 38.71 4.00e-179 621.00
IUUC-Pan-092420 Papio anubis 38.41 2.00e-176 612.00
IUUC-Psi-093683 Pelodiscus sinensis 39.24 3.00e-178 618.00
IUUC-Pma-094197 Petromyzon marinus 37.28 3.00e-35 141.00
IUUC-Pno-094783 Phaeosphaeria nodorum 36.74 7.00e-157 547.00
IUUC-Ppa-095208 Physcomitrella patens 53.64 0.00e+00 877.00
IUUC-Pfo-096299 Poecilia formosa 38.50 6.00e-176 610.00
IUUC-Pab-098706 Pongo abelii 38.90 9.00e-179 620.00
IUUC-Pca-100796 Procavia capensis 32.56 6.00e-115 407.00
IUUC-Ppe-101861 Prunus persica 78.42 0.00e+00 1399.00
IUUC-Pva-103241 Pteropus vampyrus 37.47 7.00e-167 580.00
IUUC-Pgr-103432 Puccinia graminis 35.45 4.00e-141 495.00
IUUC-Ptt-103742 Puccinia triticina 38.24 2.00e-126 446.00
IUUC-Pte-104069 Pyrenophora teres 36.29 7.00e-152 530.00
IUUC-Pyt-104650 Pyrenophora triticirepentis 36.53 2.00e-158 553.00
IUUC-Rno-105219 Rattus norvegicus 38.36 3.00e-174 605.00
IUUC-Sce-106271 Saccharomyces cerevisiae 34.93 7.00e-143 501.00
IUUC-Sha-107550 Sarcophilus harrisii 38.52 5.00e-177 614.00
IUUC-Sja-107664 Schizosaccharomyces japonicus 35.95 2.00e-153 536.00
IUUC-Spo-108239 Schizosaccharomyces pombe 35.66 1.00e-155 543.00
IUUC-Ssl-108626 Sclerotinia sclerotiorum 35.29 2.00e-158 552.00
IUUC-Smo-109477 Selaginella moellendorffii 54.47 0.00e+00 917.00
IUUC-Sit-110000 Setaria italica 63.22 0.00e+00 1069.00
IUUC-Sly-111595 Solanum lycopersicum 72.71 0.00e+00 1250.00
IUUC-Stu-112516 Solanum tuberosum 73.06 0.00e+00 1248.00
IUUC-Sar-113195 Sorex araneus 43.83 1.00e-119 423.00
IUUC-Sbi-114465 Sorghum bicolor 61.62 0.00e+00 1049.00
IUUC-Sre-115006 Sporisorium reilianum 33.90 1.00e-144 506.00
IUUC-Ssc-115929 Sus scrofa 38.34 1.00e-176 613.00
IUUC-Tgu-117282 Taeniopygia guttata 38.62 1.00e-174 606.00
IUUC-Tru-118406 Takifugu rubripes 38.26 4.00e-167 581.00
IUUC-Tsy-119170 Tarsius syrichta 38.53 1.00e-175 610.00
IUUC-Tni-119721 Tetraodon nigroviridis 38.17 4.00e-162 564.00
IUUC-Tca-121761 Theobroma cacao 80.39 0.00e+00 1450.00
IUUC-Tre-121908 Trichoderma reesei 36.17 2.00e-154 539.00
IUUC-Tvi-122547 Trichoderma virens 36.70 5.00e-159 554.00
IUUC-Tae-123224 Triticum aestivum 63.39 0.00e+00 1050.00
IUUC-Tur-126811 Triticum urartu 64.91 0.00e+00 1036.00
IUUC-Tme-126987 Tuber melanosporum 36.80 3.00e-166 578.00
IUUC-Tbe-127315 Tupaia belangeri 43.31 2.00e-108 386.00
IUUC-Ttr-129165 Tursiops truncatus 33.97 2.00e-137 482.00
IUUC-Uma-129651 Ustilago maydis 34.29 2.00e-147 516.00
IUUC-Vda-129973 Verticillium dahliae 35.76 5.00e-148 518.00
IUUC-Vpa-130163 Vicugna pacos 32.65 1.00e-60 227.00
IUUC-Vvi-131402 Vitis vinifera 77.22 0.00e+00 1390.00
IUUC-Xtr-132296 Xenopus tropicalis 40.15 1.00e-178 619.00
IUUC-Xma-133028 Xiphophorus maculatus 39.47 2.00e-177 615.00
IUUC-Yli-134484 Yarrowia lipolytica 36.66 4.00e-149 521.00
IUUC-Zma-135938 Zea mays 59.36 0.00e+00 1050.00
Created Date 25-Jun-2017

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