iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113806

Ensembl Protein ID

Sb08g002920.1

UniProt Accession

C5YRN9; C5YRN9_SORBI

Genbank Protein ID

EES15660.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G033900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g002920	Sb08g002920.1	Sb08g002920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.00e-10	39.6	553	595

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +Cg  g     lv+C+ C  ++H +C + + +  lp+ + w+Cp+C 
   Q: 553  CRICGMDGT----LVCCDGCPWAYHSRCIGQN-KAFLPQGD-WFCPECV 595
           99**99999....*******************.*******7.******6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDAEPGREGS DRAPADASPA APPDGDEAMA GTSSGVAAAA AAAEEPVADT VAGAAERGRD 60
AETSASEPGV DADEGGAGGE QRPAAPQADE VDEGGAVGEE QPDGTAANGD GTAANGAVDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGG AGCCCGGACG GGAGGGTTCC GATCGGGCGC CCGCCGACGC CTCCCCCGCC 60
GCGCCGCCAG ACGGTGACGA GGCGATGGCG GGGACGAGCT CTGGCGTCGC TGCTGCTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0042626--F:ATPase activity, coupled to transmembrane movement of substances
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_08g002900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009451	Aspergillus nidulans	50.00	7.00e-12	65.50
IUUC-Gma-043962	Glycine max	34.84	1.00e-171	597.00
IUUC-Mac-065252	Musa acuminata	40.47	0.00e+00	828.00
IUUC-Nfi-068496	Neosartorya fischeri	50.00	3.00e-11	63.50
IUUC-Pop-099219	Populus trichocarpa	34.41	5.00e-165	575.00
IUUC-Sit-109749	Setaria italica	77.27	0.00e+00	2683.00
IUUC-Tur-125978	Triticum urartu	63.96	0.00e+00	1700.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence